Gene XfasM23_2127 details

Gene Information

• Locus tag: XfasM23_2127
• ID: 6202528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 2399109
• End bp: 2399678
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641703643
• Product: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
• Protein accession: YP_001830799
• Protein GI: 182682639
• COG category: [V] Defense mechanisms
• COG ID: [COG3023] Negative regulator of beta-lactamase expression

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.352213
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCCC CCTACCCCCC CATTCAGCGA CACCCTCTGC CCTACGTCAC CGCACTACAA 
CTACGGCCAC TGGACACCAT CACCCTGGCA GTCATTCATT GCACCGAACT CCCCGACTTA 
GCAACAGCAC GCACCTATAG CGAGCGCGTG CTCTATCCGA GCGGCACCGG CGACAGCGGC 
CATTACTATA TCGATCGCAA CGGACACATT GAACAATACG TGCCCCCAGA ACGAATCGCA 
CACCACGTCC GCAACCAAAA CGCACACACC CTAGGCATCG AACTCGTGAA CCGTGGCCGC 
TACCCCCATT GGCTAGACAC CCGCCATCAA ACAATGGACG AACCCTATCC AGCAGCCCAG 
ATCCAAGCCC TGATCGCACT GCTGACGTGG CTGACACACA CACTACCGGC ACTCAACAGC 
ATCGCCGGCC ACGACACACT GGACACCGAA CACGTCCCGG CCAGCAACGA CCCCACGCAA 
CTGGTTCCAC GCAAACATGA CCCCGGACCG CTTTTCCCCT GGGATCACAT CAATGCAGCA 
CTACCACACT TACAGCACCT GACAACCTAA 

 

Protein sequence

MPAPYPPIQR HPLPYVTALQ LRPLDTITLA VIHCTELPDL ATARTYSERV LYPSGTGDSG 
HYYIDRNGHI EQYVPPERIA HHVRNQNAHT LGIELVNRGR YPHWLDTRHQ TMDEPYPAAQ 
IQALIALLTW LTHTLPALNS IAGHDTLDTE HVPASNDPTQ LVPRKHDPGP LFPWDHINAA 
LPHLQHLTT