| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2123 |
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| Symbol | prfA |
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| ID | 6204139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2394315 |
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| End bp | 2395400 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641703639 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001830795 |
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| Protein GI | 182682635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000913582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA CCCTGCGTCG TAAACTGGAA GCACTCGCCG AGCGCCATGA AGAACTCGAA
CGCTTGCTCT CTGATCCCAA AATCGCCTCT GACACCGACA GATTCCGTAC ATACTCCCGC
GAATTGGCGC AACTCGCACC GATTGCGACC ACACTGGCCG AAGAAACCCG TACCAAAGCC
GATCTAGCCG CCGCTGAAAC ACTACGCACC GACCCTGAAA TGCGCGAACT TGCCGAACAA
GAAATCGCCA TAGCCCAAGC ACACCTGACC ACACTTGACG AACAACTTCA GCGACTCCTG
ATTCCTCAAG ACCCCCGAGA CGAATGCAAC CTATTCCTGG AAGTACGCGC CGGCACTGGT
GGCGACGAAG CTGCAATCTT TGCCGGCAAC CTCTTCCGGA TGTACACCCG CTACGCCGAA
CGCCAGCGCT GGAAAGTCGA AGTGGAATCA GATACTCCCG GCGAACATGG CGGCTATAAA
GAAATCATAG CGCGCATTGT CGGACGCGGC GCCTACTCCC GACTTAAATT TGAATCCGGC
ACACACCGCG TACAACGCGT GCCCGCAACC GAATCCCAGG GACGCATCCA TACTTCAGCA
GCCACCGTCG CGATTATTCC AGAAGCCGAC GAAATCGCAG ACATCTCGAT CAACCCCGCT
GACCTCAAGA TCGACACATT CCGCTCCTCC GGTGCCGGCG GCCAACACGT CAACAAAACC
GAATCGGCAA TCCGCATCAC CCATCTCCCA ACCGGCGTCG TCGTCGAATC CCAAACCGAA
CGCAGCCAAC ACGCCAACCG CGACAAAGCA ATGAAACGGC TCAAAGCACA ACTGATCGAA
AGCCAACGCA GCCAACAGGC CACAGCCGAA GCAATGACAC GTAAACTGCA AGTCGGCAGC
GGCGACCGCA GCCAACGTAT CCGCACCTAC AACTTTCCCC AAGGCCGGAT CACCGATCAC
CGTGTCGAAA ACCTGACACT CTACGACCTT CCCAACATCA TCGAAGGCGA CCTAGACCCC
CTGATCGACC GACTACGACA AGAACACCAA GCCGAAGAAC TCGCACGACT GAGCAACGCC
CCATAA
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| Protein sequence | MKPTLRRKLE ALAERHEELE RLLSDPKIAS DTDRFRTYSR ELAQLAPIAT TLAEETRTKA
DLAAAETLRT DPEMRELAEQ EIAIAQAHLT TLDEQLQRLL IPQDPRDECN LFLEVRAGTG
GDEAAIFAGN LFRMYTRYAE RQRWKVEVES DTPGEHGGYK EIIARIVGRG AYSRLKFESG
THRVQRVPAT ESQGRIHTSA ATVAIIPEAD EIADISINPA DLKIDTFRSS GAGGQHVNKT
ESAIRITHLP TGVVVESQTE RSQHANRDKA MKRLKAQLIE SQRSQQATAE AMTRKLQVGS
GDRSQRIRTY NFPQGRITDH RVENLTLYDL PNIIEGDLDP LIDRLRQEHQ AEELARLSNA
P
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