Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2123 |
Symbol | prfA |
ID | 6204139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2394315 |
End bp | 2395400 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641703639 |
Product | peptide chain release factor 1 |
Protein accession | YP_001830795 |
Protein GI | 182682635 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000913582 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA CCCTGCGTCG TAAACTGGAA GCACTCGCCG AGCGCCATGA AGAACTCGAA CGCTTGCTCT CTGATCCCAA AATCGCCTCT GACACCGACA GATTCCGTAC ATACTCCCGC GAATTGGCGC AACTCGCACC GATTGCGACC ACACTGGCCG AAGAAACCCG TACCAAAGCC GATCTAGCCG CCGCTGAAAC ACTACGCACC GACCCTGAAA TGCGCGAACT TGCCGAACAA GAAATCGCCA TAGCCCAAGC ACACCTGACC ACACTTGACG AACAACTTCA GCGACTCCTG ATTCCTCAAG ACCCCCGAGA CGAATGCAAC CTATTCCTGG AAGTACGCGC CGGCACTGGT GGCGACGAAG CTGCAATCTT TGCCGGCAAC CTCTTCCGGA TGTACACCCG CTACGCCGAA CGCCAGCGCT GGAAAGTCGA AGTGGAATCA GATACTCCCG GCGAACATGG CGGCTATAAA GAAATCATAG CGCGCATTGT CGGACGCGGC GCCTACTCCC GACTTAAATT TGAATCCGGC ACACACCGCG TACAACGCGT GCCCGCAACC GAATCCCAGG GACGCATCCA TACTTCAGCA GCCACCGTCG CGATTATTCC AGAAGCCGAC GAAATCGCAG ACATCTCGAT CAACCCCGCT GACCTCAAGA TCGACACATT CCGCTCCTCC GGTGCCGGCG GCCAACACGT CAACAAAACC GAATCGGCAA TCCGCATCAC CCATCTCCCA ACCGGCGTCG TCGTCGAATC CCAAACCGAA CGCAGCCAAC ACGCCAACCG CGACAAAGCA ATGAAACGGC TCAAAGCACA ACTGATCGAA AGCCAACGCA GCCAACAGGC CACAGCCGAA GCAATGACAC GTAAACTGCA AGTCGGCAGC GGCGACCGCA GCCAACGTAT CCGCACCTAC AACTTTCCCC AAGGCCGGAT CACCGATCAC CGTGTCGAAA ACCTGACACT CTACGACCTT CCCAACATCA TCGAAGGCGA CCTAGACCCC CTGATCGACC GACTACGACA AGAACACCAA GCCGAAGAAC TCGCACGACT GAGCAACGCC CCATAA
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Protein sequence | MKPTLRRKLE ALAERHEELE RLLSDPKIAS DTDRFRTYSR ELAQLAPIAT TLAEETRTKA DLAAAETLRT DPEMRELAEQ EIAIAQAHLT TLDEQLQRLL IPQDPRDECN LFLEVRAGTG GDEAAIFAGN LFRMYTRYAE RQRWKVEVES DTPGEHGGYK EIIARIVGRG AYSRLKFESG THRVQRVPAT ESQGRIHTSA ATVAIIPEAD EIADISINPA DLKIDTFRSS GAGGQHVNKT ESAIRITHLP TGVVVESQTE RSQHANRDKA MKRLKAQLIE SQRSQQATAE AMTRKLQVGS GDRSQRIRTY NFPQGRITDH RVENLTLYDL PNIIEGDLDP LIDRLRQEHQ AEELARLSNA P
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