Gene XfasM23_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2123 
SymbolprfA 
ID6204139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2394315 
End bp2395400 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID641703639 
Productpeptide chain release factor 1 
Protein accessionYP_001830795 
Protein GI182682635 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000913582 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA CCCTGCGTCG TAAACTGGAA GCACTCGCCG AGCGCCATGA AGAACTCGAA 
CGCTTGCTCT CTGATCCCAA AATCGCCTCT GACACCGACA GATTCCGTAC ATACTCCCGC
GAATTGGCGC AACTCGCACC GATTGCGACC ACACTGGCCG AAGAAACCCG TACCAAAGCC
GATCTAGCCG CCGCTGAAAC ACTACGCACC GACCCTGAAA TGCGCGAACT TGCCGAACAA
GAAATCGCCA TAGCCCAAGC ACACCTGACC ACACTTGACG AACAACTTCA GCGACTCCTG
ATTCCTCAAG ACCCCCGAGA CGAATGCAAC CTATTCCTGG AAGTACGCGC CGGCACTGGT
GGCGACGAAG CTGCAATCTT TGCCGGCAAC CTCTTCCGGA TGTACACCCG CTACGCCGAA
CGCCAGCGCT GGAAAGTCGA AGTGGAATCA GATACTCCCG GCGAACATGG CGGCTATAAA
GAAATCATAG CGCGCATTGT CGGACGCGGC GCCTACTCCC GACTTAAATT TGAATCCGGC
ACACACCGCG TACAACGCGT GCCCGCAACC GAATCCCAGG GACGCATCCA TACTTCAGCA
GCCACCGTCG CGATTATTCC AGAAGCCGAC GAAATCGCAG ACATCTCGAT CAACCCCGCT
GACCTCAAGA TCGACACATT CCGCTCCTCC GGTGCCGGCG GCCAACACGT CAACAAAACC
GAATCGGCAA TCCGCATCAC CCATCTCCCA ACCGGCGTCG TCGTCGAATC CCAAACCGAA
CGCAGCCAAC ACGCCAACCG CGACAAAGCA ATGAAACGGC TCAAAGCACA ACTGATCGAA
AGCCAACGCA GCCAACAGGC CACAGCCGAA GCAATGACAC GTAAACTGCA AGTCGGCAGC
GGCGACCGCA GCCAACGTAT CCGCACCTAC AACTTTCCCC AAGGCCGGAT CACCGATCAC
CGTGTCGAAA ACCTGACACT CTACGACCTT CCCAACATCA TCGAAGGCGA CCTAGACCCC
CTGATCGACC GACTACGACA AGAACACCAA GCCGAAGAAC TCGCACGACT GAGCAACGCC
CCATAA
 
Protein sequence
MKPTLRRKLE ALAERHEELE RLLSDPKIAS DTDRFRTYSR ELAQLAPIAT TLAEETRTKA 
DLAAAETLRT DPEMRELAEQ EIAIAQAHLT TLDEQLQRLL IPQDPRDECN LFLEVRAGTG
GDEAAIFAGN LFRMYTRYAE RQRWKVEVES DTPGEHGGYK EIIARIVGRG AYSRLKFESG
THRVQRVPAT ESQGRIHTSA ATVAIIPEAD EIADISINPA DLKIDTFRSS GAGGQHVNKT
ESAIRITHLP TGVVVESQTE RSQHANRDKA MKRLKAQLIE SQRSQQATAE AMTRKLQVGS
GDRSQRIRTY NFPQGRITDH RVENLTLYDL PNIIEGDLDP LIDRLRQEHQ AEELARLSNA
P