| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2114 |
|---|
| Symbol | |
|---|
| ID | 6202653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2384390 |
|---|
| End bp | 2385580 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641703626 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001830786 |
|---|
| Protein GI | 182682626 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000314964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGG ATAAGTTCAA ACGCACTAAG TTGCACGTAA ATGTTGGTAC GATTGGTCAC
GTTGACCATG GCAAGACTAC ACTGACTGCG GCGCTGACCA AGGTGGGTGC TGAGCGTTTT
GGTGGCGAGT TTAAGGCATA CGATGCGATT GACGCGGCAC CTGAAGAGAA GGCGCGCGGG
ATTACTATTT CTACGGCGCA CGTCGAGTAT GAAACTGAAG TCCGCCACTA TGCCCATGTG
GACTGTCCTG GTCATGCTGA TTATGTGAAA AACATGATTA CAGGTGCGGC GCAGATGGAT
GGTGCGATTT TAGTATGTTC TGCTGCTGAT GGTCCGATGC CTCAGACTCG TGAACACATT
TTGTTGGCTC GCCAGGTGGG TGTGCCTTAC ATTGTTGTGT TCTTGAATAA GGCTGACATG
GTGGATGATG CTGAGTTGCT TGAGCTTGTG GAGATGGAAG TTCGTGAGTT GTTGAGCAAG
TATGATTTTC CTGGTGATGA CACTCCTATT GTGAGAGGTT CCGCGTTGAA GGCGCTGGAG
GGTGATCAGT CTGAGATTGG TGTACCGGCG ATTATTCGAC TGGCGGAAGC ATTAGATACC
CACATTCCGA ATCCGGAGCG TGCGATTGAT CGTCCGTTTT TGATGCCTGT GGAAGATGTG
TTTTCGATTT CTGGTCGTGG CACTGTGGTG ACAGGTCGTA TTGAATGTGG TGTGATTAAG
GTTGGCGATG AGGTGGAAAT AGTTGGCATT CGTCCGACGT CGAAGACGAT TGTTACGGGT
GTTGAGATGT TCCGTAAGTT ATTGGATCAA GGTCAGGCTG GTGACAACGC GGGTCTATTG
TTGCGCGGTA CGAAGCGTGA TGAAGTGGAG CGTGGTCAGG TGTTGGCGAA GCCTGGTTGT
ATAAAGGCGC ATAAAGAATT TGAGGCTGAG GTGTATGTGC TTTCGAAAGA GGAGGGTGGT
CGTCATACTC CGTTTTTCAA TGGATACACT CCGCAGTTTT ATATGCGTAC AACAGACATT
ACCGGTAAGG TCTGTTTACC TGAGGGTGTA GAGATGGTGA TGCCTGGTGA TAATGTGAAG
GTGACGGTAT CTCTGATTAA TCCTGTGGCG ATGGGTGAGG GTCAGCGCTT TGCGATCCGT
GAAGGTGGGC GGACAGTGGG TGCTGGCGTT GTTTCGAAGG TTATTGGTTA A
|
|---|
| Protein sequence | MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI DAAPEEKARG
ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKADM VDDAELLELV EMEVRELLSK YDFPGDDTPI VRGSALKALE
GDQSEIGVPA IIRLAEALDT HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK
VGDEVEIVGI RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGC
IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV EMVMPGDNVK
VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG
|
|---|
| |