| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2088 |
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| Symbol | |
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| ID | 6203462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2346580 |
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| End bp | 2349978 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703599 |
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| Product | ribonuclease |
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| Protein accession | YP_001830760 |
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| Protein GI | 182682600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAA TGTTAATCAA TGCTACACAG GCCGAAGAGC TTCGCGTAGC AATCGTGGAT
GGCCAGAGCC TGTACGACAT TGATATTGAG CAACCATCTA AAGAACAAAA AAAATCCAAC
ATCTATAAAG GCCGTATCAC CCGGCTGGAA CCGTCTCTCG AAGCCGCATT TGTTGATTAC
GGCACAGATC GCCACGGCTT TTTGCCGTTA AAAGAAATCT CCAAAGACTA CTTCCAAGCC
GGTCTGGACC ATCACAAAGC TGGTATCCGA GAGTTATTAC GCGAGGGTCA AGAGATCGTC
GTTCAGGTTG ATAAAGAAGA ACGTGGCAAC AAAGGAGCCG CTCTGACCAC GTTCATTTCA
CTCGCCGGTC GCTACATGGT GTTGATGCCA AACTCGCCAT CAGCAGGCGG AGTCTCACGT
CGCATTGAAG GCGAAGATCG CGCTGCGCTG AAAGAAGCAC TGGAAAAACT GAACATTCCC
AACGATATGG GAGTGATCAT CCGTACTGCT GGCGTGGGCC GTGACACTCA AGAGCTACAA
TGGGATCTGG ATTTTTTACT GCACGCTTGG CGCGCCATTG CCGAAGCTGC ATTGAGCAAG
CCTGCTCCAT TGCTCATCTA CCAAGAATCG CGCCTCATCA TCCGCGCCCT ACGCGACTAT
TTCCGTGCTG ACATCGGCGA AATTCTAGTC GATACAGAGG AAATGTATCA GGACGCCCAC
CAATTCATGC GGCACGTGAT GCCGCAAAGC CTTCGCAAGC TCAAATACTA CAAAGACGAC
ATCCCTCTGT TCAATCGCTT CCAGATCGAA TCGCAGATCG AAGGTGCCTA CGAACGTAAC
GTACGCCTCC CCTCCGGCGG CTCCATTGTG GTTGATCAAA CAGAAGCGCT CACTGCCATT
GATGTCAACT CTTCACGAGC TACAAAGGGT AACGACATTG AGGAAACCGC ATTCCAAACC
AACCTGGAAG CAGCCGATGA AATCGCACGC CAACTGCGCC TACGCGATGT AGGTGGGTTA
GTAGTGATTG ACTTCATTGA TATGTCCTCT TCAAAACACC AACGTGAGAT CGAAACCCGT
CTACAAAACT GTCTCAAATA CGACCGTGCA CGCGTGCAGC TTAGCCGGAT CTCACGCTTC
GGCCTGTTGG AGATGAGTCG TCAACGCCTA CGCCCAAGCC TGGGCGAATC CAGCCAAATC
GTTTGCCCAT ACTGCGACGG ACACGGGCGG ATGCGCAGCA TCGAATCGCT ATCACTGTCG
ATCATCCGTA TAGTCGAAGA ACACGCGATG AAGGAAAGCA CTGGACAGGT GCTTGTCCAG
ACACCAGTAG AGATAGCCAA CTACCTGCTC AACGAGAAGC GCCGTGCAAT TAATGAGATC
GAGAAACGCC ATGACGCACC GATCATCATC ATCGCTGACG AGCAATTACA TACCCCGCAC
TACGAGGTGA CTCGTCTACG TGAGAACGAA TTAAGCGAAG AAACAGGCAA ACCAAGTTAC
CAACGCAACA CCCCACGCAA GCTACCGGTA CATGCACTCA CCAAATCGCA ACTTAACATC
CCGCCAGCAC CAGCAGTGAA ATCGATCACC CCACCGCAAC TGGCACCAAC TCAAGAAAAC
ATACCAACAA TCCGAGAGCA ATCCGCTGAG AACCGAGCAC ACCCTATTCC GGAACTTGTA
TCCAGCCTAG CGAGTTGGCT AAAACGTATC TTTGGAAATA CTGACAAGCG ACAGACCGCA
AGTAACAGCT CGCATCCTGC GCCCCTGCAA CAGAACCGCA ATGGCAATGT GCAACGCAAC
GAACGCAACC GCCGTGATGG CCAAATCGCT ACTAGCAACA CCCAACCACA GCAGCAAAGC
AGCAGCCACC GCGACAATTA TCGCCATAAC GAAAGCAACA ACTATCCGCA AATCCAGAAC
CAATGCACAG CAGACACAAA CGGGAAATTG CGGAACGAAT CACAAACACC AAAATCGTCA
GCATATGTGT CGAAATTACC CCAGATGCCA AGGCAACCCC AACCACAGCT CCCAAAAACA
CCAAGGACGC AATCGCAACC GACACAAAAC AGCACGAAAA CGATATTAGA CAAACAGCCT
GCACCTGTAC TCCATGGTGA AGACAACACG CTACAGAAAG CAAAACCGAT CCCGTTAACT
GCGGAAGCGG TGCTTAATAA CATCCCTGCG CCTAGCATGA CAGCCACACC GTCAGGTAAA
GACCAAGATG CTTTACCAAC AACATCGAAC GTGACTCAAG GCACATCAAA CGCGCTGATC
GAAGCTAAAT CAACCACAAA GACGAACATC AATACAAATA CTGACATTGA ACCGCAACAA
AACAATCATG AAGGTACTGG GAACAACGAC GGCAGCAACC GGCGGCGCCG TGGTCGTCGT
GGTGGTCGTC GTCGTCGTCG GAATACTTCT CTCGGTAACG AAACCAATGC TGTAAGCGAA
AGCAATAGCA TCAAACTATC CAACGACACT GAAACCGACA ATGCGGACAA TATCGAATCA
CCCCAAGCCT TGCGCCCTGC CATGCAGGAA AACAAGCGCC AACCGGAGTT TGAGTTCGAT
GACCTAGCAC CCGCAGCTCC GATCACCGCA CCGTTACGTA AGGCAATAGC TGCCGAGAGA
GAGGGGATAT CCGCTGATCT CACAACTACA GCACCTCAAA GCATAATGGA AACCGCGTCC
AGAACGCATA TCGCCTCGCA AATGGCTCCC CAAAGTGAAA CCAGTGCTGC GTCAACCACG
CCTAATGCCT CTGTACAAGC TACTAAGACT CATACGCATA AAGATGTCGT TTCTGATTCC
CCGTCAAGAA CACCTTACAA CGCTCACTCC AACACCACCA GACACAGTTC GGGGCGTCGT
CTGGAAACTC TCTCTACGGC ACATCCCTCT GCCAAGGCAC CTCCATCAGA GCATATAACA
CCAACATCAC GCTCAAACGC GAATACTAAA ACCACAAAGA CAGAGATACC AAACAAACCA
ACCAATGCGA ACAGCGATAC GGCAGCTCGC CCAACAACCA CTGATGTGCT GGTTGTAACG
AATCAACCAG TGATAGCAAC CAAGCCTTCA ACAACGATAG AAAAAGCACA AACCAAAGTT
ATTCCCTCCA CTACATACAA TAATGAACAC ATCGAAACGA AGCGAAAGAT CGTTACAACG
GAATCCGAAA CAACCCAACC ACCAGTACGA AAGCAACGCT TGCCGATGCA AAATCCACTA
CCCAAGGTAG TCGCTCCACT AGAAGACAAG AAGCAAGCCC CATTCGTGGA AAATACAACC
CAACGTAATA TTAATAACGC GACCACAACA TCGCAGAACG ACAAATCATT AGGTTTTACA
AAAAACAACG AAGAAAATAG TGACAACAAT ACACTATAA
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| Protein sequence | MKRMLINATQ AEELRVAIVD GQSLYDIDIE QPSKEQKKSN IYKGRITRLE PSLEAAFVDY
GTDRHGFLPL KEISKDYFQA GLDHHKAGIR ELLREGQEIV VQVDKEERGN KGAALTTFIS
LAGRYMVLMP NSPSAGGVSR RIEGEDRAAL KEALEKLNIP NDMGVIIRTA GVGRDTQELQ
WDLDFLLHAW RAIAEAALSK PAPLLIYQES RLIIRALRDY FRADIGEILV DTEEMYQDAH
QFMRHVMPQS LRKLKYYKDD IPLFNRFQIE SQIEGAYERN VRLPSGGSIV VDQTEALTAI
DVNSSRATKG NDIEETAFQT NLEAADEIAR QLRLRDVGGL VVIDFIDMSS SKHQREIETR
LQNCLKYDRA RVQLSRISRF GLLEMSRQRL RPSLGESSQI VCPYCDGHGR MRSIESLSLS
IIRIVEEHAM KESTGQVLVQ TPVEIANYLL NEKRRAINEI EKRHDAPIII IADEQLHTPH
YEVTRLRENE LSEETGKPSY QRNTPRKLPV HALTKSQLNI PPAPAVKSIT PPQLAPTQEN
IPTIREQSAE NRAHPIPELV SSLASWLKRI FGNTDKRQTA SNSSHPAPLQ QNRNGNVQRN
ERNRRDGQIA TSNTQPQQQS SSHRDNYRHN ESNNYPQIQN QCTADTNGKL RNESQTPKSS
AYVSKLPQMP RQPQPQLPKT PRTQSQPTQN STKTILDKQP APVLHGEDNT LQKAKPIPLT
AEAVLNNIPA PSMTATPSGK DQDALPTTSN VTQGTSNALI EAKSTTKTNI NTNTDIEPQQ
NNHEGTGNND GSNRRRRGRR GGRRRRRNTS LGNETNAVSE SNSIKLSNDT ETDNADNIES
PQALRPAMQE NKRQPEFEFD DLAPAAPITA PLRKAIAAER EGISADLTTT APQSIMETAS
RTHIASQMAP QSETSAASTT PNASVQATKT HTHKDVVSDS PSRTPYNAHS NTTRHSSGRR
LETLSTAHPS AKAPPSEHIT PTSRSNANTK TTKTEIPNKP TNANSDTAAR PTTTDVLVVT
NQPVIATKPS TTIEKAQTKV IPSTTYNNEH IETKRKIVTT ESETTQPPVR KQRLPMQNPL
PKVVAPLEDK KQAPFVENTT QRNINNATTT SQNDKSLGFT KNNEENSDNN TL
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