Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2077 |
Symbol | |
ID | 6203441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2336416 |
End bp | 2337423 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641703588 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001830749 |
Protein GI | 182682589 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAA CAATTACGGT GATCCGCGGT GATGGTATCG GCCCGGAAAT CATGGATGCC ACCCTGTCGG TATTAAACGC GTTACAAGCG AATCTGAATT ACGAATTCGC AGATGCAGGC TTGAGCGCAC TTGAAAAACA CGGAGACTTG CTACCGGAAT CCACCCTGAA TTCAATCAGC AAGAACAAAA TCGCGCTAAA AAGCCCGCTC ACAACCCCGG TAGGTGAAGG TTTCAGCTCG ATCAATGTCG CCCTGCGACG TAAATTCGAC TTATACGCCA ACGTTCGCCC CGCAAAATCT TTCCCAAATA CCAAGTCACG CTTTAGCGAT AACGTAGACC TGATCACCGT ACGGGAAAAT ACCGAGGGTG CCTACCTGAG CGAGGGTCAA ACCATCTCTC CTGACGGAGA AGTTGCCACT TCAAGCGCAC GAGTGACCCG TAAAGGGTCG GAACGTATCG TCCGTTACGC ATTCGACTTA GCCCGAACAA CGGGCCGCAA AAAGGTCACC GCAGTACACA AAGCCAACAT CATTAAATCA ACCTCTGGAC TATTTCTGAA AACCGCCCGA GACGTCGCAA GCCAGTACCC AGAAATCGAT TTCCAAGAAA TGATCGTCGA CAACACTTGC ATGCAACTTG TAATGCGCCC AGAACAATTC GACATCATTG TCACCACAAA CTTGTTCGGT GACATCCTCT CAGATTTGTG CGCAGGCTTG GTCGGCGGTT TAGGCTTGGC TCCGGGCGCC AACATTGGTA ATGAACAAGC CATCTTCGAA GCCGTACATG GCTCGGCTCC AGACATCGCT GGACAAGGTA AAGCCAATCC ATGCGCGCTG CTGCTAGGTG CTGTACAAAT GCTGGATCAT ATCGGTCAAC CACAAAACGC CGAACGCCTA CGCAACGCAA TCGTGGCCAC ACTGAATGCC AAAGATTCGC TGACTCCCGA TCTGGGGGGT AACGGCAACA CCATGGGATT CGCCAAGGCA ATTGCAAGCA GACTCTAA
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Protein sequence | MTQTITVIRG DGIGPEIMDA TLSVLNALQA NLNYEFADAG LSALEKHGDL LPESTLNSIS KNKIALKSPL TTPVGEGFSS INVALRRKFD LYANVRPAKS FPNTKSRFSD NVDLITVREN TEGAYLSEGQ TISPDGEVAT SSARVTRKGS ERIVRYAFDL ARTTGRKKVT AVHKANIIKS TSGLFLKTAR DVASQYPEID FQEMIVDNTC MQLVMRPEQF DIIVTTNLFG DILSDLCAGL VGGLGLAPGA NIGNEQAIFE AVHGSAPDIA GQGKANPCAL LLGAVQMLDH IGQPQNAERL RNAIVATLNA KDSLTPDLGG NGNTMGFAKA IASRL
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