Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2069 |
Symbol | |
ID | 6203429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2324197 |
End bp | 2325555 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641703580 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001830741 |
Protein GI | 182682581 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCC GCTGCCTCGC CTTGGCCGTG ACCACCGCCC TATTTCCCGT CGTTTCACAA GCGACAAACC TATTACAAGT CTACGAAATG GCACGCGCTG CTGACCCTCA ATTAAGCGCA GCCGAATCCA CTCGGCTATA CAGCGTTGAA GGGCAAGTTC AGGCACGTGC AGCGCTGCTG CCGCAGATGA GCGGCACAGC CACCCTGGCA CGTAGCCGCA CTGAATACGA CGGTATCAGC GGATCAGCCA TCAGTAAGAA CCGCCAATAC AGCATCAACG GTAGCCAAAC TCTGTTCAAC TGGAGCCAGT TTTCCAACCT TCGATCACAA CGCGAGATCG CCAAAGCCGC CGATTTCACA CTGGAATCGG CCAAACAAAA CTTGATTGTG CGCAGCTCAG CTGCATACTT CAGCGTCTTG ATCGGGATTG AATCGCTGAT CGCCGCCGAA GCGAATGAAG CATCAGCTAA GCGCCAGTTT GATTACGCAC AGAAACGTCT TGAGGTTGGC CTATCACCCA TCACAGACCT TCATGAAGCA CGTGCCAGCT ACGACCAAGC CCGTGCAGAC ACCATCACTG CACGCAACAC ACTGCAAGAC TACTACCAAG CATTGGCAGA GATCACTGGA CAACCCGTCA CTGACCTGCG TGGCCTCCCT GAAGACTTCC GACCAGAAGT GCCAGCGAAA TTCAGTAACA TTGACCAGCT GGTCACTGAA GCCATCTCCA ACAATCCGTC GCTAAAAGCG CAGCAATTGC AAGTCAATGC CGCGGAATCC AGCATCTCAG CCGCACGTGG CGAGCACTAC CCAACACTGT CACTGAGTGG AAGCCTGGGG AAAAGTAAAG CCTGGGGATC CTCCAGCGGC GCAATGAGCG CACTCATTCC TGACAGGAAC CAACCGATTA GCGACACCAA CAACTTACAA TTAACGCTGT CAATACCACT CTTTGCAGGT GGTGCAACCC AATCCAGGGT CCGTCAGGCA ATCGCACAAC GCGACATCCA ACAGGATAAC TACGAGCAGA ATAAGCGCAC GCTAAACCGT AATACCCGCA ATGCCTACCA AAATATGATT GCAGGCATCA GCGAGGTCGA AGCGCGTCGC TTGGCAGTCG TCTCAGCACA AGCGGCCCTA GATGCTTCTC AAGTCGGCCT GGAAGTCGGC ACCCGAACCC TGCTGGACGT GGTACAGAAC CAACGTATCC TTTTCTCGGT ACGGCAAGCC TATGTACAAG CACGCTACAA CTTCCTACAA AACCGTCTAC TACTTTCCCA GAACAGCGGC ACCCTGAGCA TTGAGGATGT ACAAGAGATC AATCAATTGC TGACGGCTGA TTCCGAGAGA AAACTGTAA
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Protein sequence | MIRRCLALAV TTALFPVVSQ ATNLLQVYEM ARAADPQLSA AESTRLYSVE GQVQARAALL PQMSGTATLA RSRTEYDGIS GSAISKNRQY SINGSQTLFN WSQFSNLRSQ REIAKAADFT LESAKQNLIV RSSAAYFSVL IGIESLIAAE ANEASAKRQF DYAQKRLEVG LSPITDLHEA RASYDQARAD TITARNTLQD YYQALAEITG QPVTDLRGLP EDFRPEVPAK FSNIDQLVTE AISNNPSLKA QQLQVNAAES SISAARGEHY PTLSLSGSLG KSKAWGSSSG AMSALIPDRN QPISDTNNLQ LTLSIPLFAG GATQSRVRQA IAQRDIQQDN YEQNKRTLNR NTRNAYQNMI AGISEVEARR LAVVSAQAAL DASQVGLEVG TRTLLDVVQN QRILFSVRQA YVQARYNFLQ NRLLLSQNSG TLSIEDVQEI NQLLTADSER KL
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