| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2054 |
|---|
| Symbol | asnC |
|---|
| ID | 6203581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 2305321 |
|---|
| End bp | 2306721 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641703564 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_001830726 |
|---|
| Protein GI | 182682566 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.424438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGG CTAGTGTTGA GCAAATGTTC TCCGGGAAAA TTCAGGTGGG CAGTGAAGTG
ACAGTCCGTG GCTGGGTACG AACCCGGCGC GATTCTAAAG CGGGTCTCAG TTTTGTCAGT
GTCAGTGATG GTTCCTGCTT CGCCGCAATT CAGGTCGTCA CTCCAGCGCA TCTTCCAAAT
TACGAAACAG AAGTACGCAA ACTCACTACA GGTTGCGCAG TCATCGTGAT CGGCACCCTG
GCACCCTCTC TGGGCCAAGG TCAACAGTTC GAAATCCAGG CCCAGAGCAT TGAGGTCGTC
GGTTGGGTCG AGGATCCGGA AACATATCCG ATCCAACCCA AACAACATTC ATTGGAATTC
CTGCGGGAGG TGGCGCACCT GCGTCCACGC ACCAATCTGT TTGGTGCAGT CGCTCGTATC
CGCCACTGTC TATCGCAGGC GGTACACCGT TTTTTTCACG AGAATGGTTA TTACTGGATC
ACCACACCGA TCATCACCAC TTCCGACGCC GAAGGTGCCG GACAAATGTT CCGCGTCTCT
ACGCTGGATT TAGTCAATCT ACCGCGCACG GAGACCGGCG GAATTGACTT TTCGCATGAT
TTCTTTGGAA AAGAAACGTT CTTGACCGTC TCCGGGCAAC TCAACGTAGA AGCCTATGCA
CTGGCACTGA GCAAGGTGTA TACCTTCGGC CCGACGTTCC GAGCTGAGAA TAGTCACACG
CCGCGTCACC TTGCGGAATT TTGGATGATT GAGCCAGAAA TCGCCTTCGC GGATCTGGCT
GAGGATGCAC GTGTGGCCGA ACAGTTCCTC AAATTTCTTT TCAAAACGGT ACTGGAGGAA
CGTGACGACG ACTTGGCATT CATTACCGAA CGGGTAGAGA AAACCACGAT CAGCAAGCTG
GAAGGGTTTA TCAATTCACC ATTCGAACGG ATCGAGTACA CAGATGCCAT CAAGCTGTTG
GAAAGGTCGG GGAAAAAGTT TGATTTTCCG GTTGAATGGG GACTGGATCT ACAAACCGAG
CACGAGCGCT GGTTGACCGA GAAGCACATC GGCCGTCCGG TGGTGGTGAC GAACTATCCC
GAACACATCA AAGCTTTTTA CATGCGGCTG AACGACGATG GGAAAACGGT CGCGGCGATG
GATGTGTTAG CCCCGGGCAT CGGCGAAATT ATTGGCGGCA GCCAACGTGA GGAGCGTTTG
GAAATGCTTG ATATACGGAT GGCGCAATTC GGTCTGGACC CGGCACATTA CCAGTGGTAT
CGGGATTTTC GCCGCTACGG CTCGGTGCCG CACGCGGGGT TCGGCCTGGG GTTTGAACGT
CTCGTGGTCT ACGTCTGCGG GCTGAGCAAT ATCCGCGATG CAATCCCCTA CCCGCGTGCG
CCAGGCAGTG CCGAGTTCTG A
|
|---|
| Protein sequence | MTVASVEQMF SGKIQVGSEV TVRGWVRTRR DSKAGLSFVS VSDGSCFAAI QVVTPAHLPN
YETEVRKLTT GCAVIVIGTL APSLGQGQQF EIQAQSIEVV GWVEDPETYP IQPKQHSLEF
LREVAHLRPR TNLFGAVARI RHCLSQAVHR FFHENGYYWI TTPIITTSDA EGAGQMFRVS
TLDLVNLPRT ETGGIDFSHD FFGKETFLTV SGQLNVEAYA LALSKVYTFG PTFRAENSHT
PRHLAEFWMI EPEIAFADLA EDARVAEQFL KFLFKTVLEE RDDDLAFITE RVEKTTISKL
EGFINSPFER IEYTDAIKLL ERSGKKFDFP VEWGLDLQTE HERWLTEKHI GRPVVVTNYP
EHIKAFYMRL NDDGKTVAAM DVLAPGIGEI IGGSQREERL EMLDIRMAQF GLDPAHYQWY
RDFRRYGSVP HAGFGLGFER LVVYVCGLSN IRDAIPYPRA PGSAEF
|
|---|
| |