| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2049 |
|---|
| Symbol | |
|---|
| ID | 6203399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2299523 |
|---|
| End bp | 2303026 |
|---|
| Gene Length | 3504 bp |
|---|
| Protein Length | 1167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641703559 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_001830721 |
|---|
| Protein GI | 182682561 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGT CCACGATCAA GCTGTCCGGT TTCAAATCGT TTGTTGATCC TGCCACGCTC
CATCTACCAA CCAACATGAC CGGTATCGTT GGTCCCAATG GCTGCGGCAA ATCCAACATT
ATTGATGCGG TGCGTTGGGT GATGGGTGAA AGCTCAGCTA GCCGGTTACG AGGCGATTCG
TTGACGGACG TGATTTTTTC CGGATCTTCC GCCCGTAAAC CGGTGGCACA GGCCACCGTT
GAGCTGATCT TTGATAACAG CGACCACACC ATCAGTGGAG AATTCGCGGC ATTCAACGAA
ATTTCGGTCA AACGTACCGT GAGCCGTGAT GGCTCCAGCG TCTACTCCCT GAACGGCACC
AAGTGCCGCC GCCGCGATAT TACCGACTTG TTCCTAGGCA CCGGCTTGGG GCCGCGCAGC
TACTCCATCA TCGAACAGGG CATGATCAGT CAGATTATCG AAGCGCGCCC TGAAGATTTG
CGTATCTACC TGGAAGAAGC TGCCGGCATA TCCAAATACA AAGAACGGCG TAAGGAGACC
GAGAGCCGCA TCCGTCATAC TCAAGAAAAT CTGGATCGCC TGAACGATTT GCGTGAAGAA
ATCGGTAAAC AGCTTGAACA CCTCAAGCGC CAAGCGCGCC AAGCTGAGCA ATATCAGACA
TTGCAAGAAG AACGCCGTGT TAAAGATGCC GAGTGCAAGG CCTTGCAGTT CCGTGAACTG
GACACCCGTC TCCAAGGATT GCGCCAGGCA TTACTTCAAG AGGAAACCCG CTTACAGCAA
TTGCTTGCCG AACAGCGTGA AGCCGAGATG CGGATCGAAA CCTCCCGCGT GCGGCGTGAA
GAGTCTGCCG AAGCCTTGGC AACCGCACAG GCCGATGTCT ATCAAGTAGG TGCCACACTG
GCCCGCATCG AACAACAGAT CCAACATCAA CGTGAAATGT CGCAGCGTTT GCACAAAGCA
CGCGATGAAG CACAGAAACA ACTGATCGAC CTGACCCGTC ACATGGGTGA CGATGCCGCC
ACACTGGCGG TGTTACGTGA GGCCGTCGAG AACAACGAAC CCCAGTTGCA CGTGCTGCGT
GAGCAGAGCG AATTTAAACA AGACGCACTG CGCGACGCCG AAGCAGCGTT GACAGACTGG
CAGCAGCGTT GGGACAGCCA CAACCGAGAG ACCAGCGAAG CATCGCGTGC TGGTGAAGTT
GAACGTACCC GTGTTGACTA CTTGGACCGT CAGACCCTGG ACGCCGAGCG GCGGCGTGAC
CTATTGCTTG CCGAACGTGC CGGACTTGAT CTGGACGCAT TGGCCGAAGC CTTCGAGCAG
ATCGAAGTGC AATACGAAAC CCAGAAAGCC GCACTAGACG GCCTCAACGA CCAACTTGAA
CAACGTAAAC AGACATTGGC GGACGTACAG CACCAGCAGC GTACTGCGCA GACCGAACTG
GCCGATGTCC GTAAACATGC CCAGACCGCC CGTGGTCGCC TATCTTCACT TGAGACCCTG
CAACAGGCCG CCCTTGGCCA GGAACAAGGT GCCGCCATGA CCTGGTTGCA GGCCCATGGA
TTGAGTTCGG CCGCCCGCGT AGGAGAACGT ATTCGTGTCG AGAGCGGCTG GGAAAACGCC
CTTGAAAGCG CCCTTGGTCA CATGATTGAA GGCGTCCTTG TTGATGACCC GCAGACCTTG
GTTGAAGCAT TGAACAGCCT TAACGAAGGC CACATCGCAT TGGTGGCTGA CACCCAGACA
CAGATCCAAG TGGCCCCCAC ATCCCTGGCC GCTAAAGTCC AGGGACCTGT TGCGATCCGC
CGTTTACTGA CCCATCTGCA CGGCGCTGAA GATTTAGTCG CTGCCCGCGC CCTGCAAGCA
ACACTGGGCG AGGGCGACTG GGTGATGACC CGCAACGGTG AATGCCTGGG TGAAGGATGG
CTACGCGTAT CCCGTTCTGG AGCCGCTGAG CAAGGCGCAT TACTGCGTGA ACGTGACATT
CAAACCCTGC GCGCCCAGAT TGAGACCCTG CAAGAGCGCG AAGCTGAATT GGAACATCGC
TTGACGCACT TCCGCGACCA CCTATTGATG GCCGAACAGC ACCGCGAAGA TGCACAACGC
CAACTCTATA TTGCACATCG TGGCGTCTCC GAACTGGCCG GCCAGCGCCA GGCCCACCAC
GGCAAACTAG AGGCCTCCCG TGGCCGTATC CAGCACATTG AAGCCGAGAT TGCCCAGTTA
TTAGAAACCT TGGATACCAG CCGTGACCAA GCCCGTACTG CGCGCGCCAC ACTGGATGAG
GCAGTCACCC GCATGGGTGA CTTAGAGAGC CAACGTCAGG CATTGCACGC TGAGCGGCAA
CAACTTAACC TGACCCGTGA CCAAGCGCGT GAAGCCGCAC GCAGCGTCCG TGAAGCTATG
CATGCCTTAG CCTTGACCTT AGAGTCACAG CGTACCCAAA TGGTGTCCTT GAGTCAGACA
TTGCAGCGCA TGGACAACCA GCGCGGCCAG CTCGACGCAC GCTTAGAAGA ACTGATGAAC
CAACTCAGTG AAGGTGATTC CCCGGTGGAG ATCCTGGAGC AACAACATCA GGCTGCCCTC
AGCGAACGAG TCCGTACCGA ACACCTCTTG GTCCAAGCAC GTACTCATCT TGACGGCATT
GATGCCGAAC TGCGCCAATT TGAACACACC CGTCAGCAGC GCGATGAACA GGCCTTGTCC
CAGCGCGAGC GCATCTCTCA ATGCCGCCTT GACCAACAGG CCCTCGCCTT GGGCGCTGAA
CAGCGGCAGG CTGCGGTGGA GAAAGCCGGC TTCGTCTTAC AGCACCTTGT GGATGCCCTT
CCTGAAGCTG CCAACCCAGC TGACTGGGAG GCCGCGATAG AACAACTGGA TATACGTATC
CGTCGTCTGG AACCTGTCAA TCTGGCGGCC ATTCACGAGT ACAACGAAGC CGCACAGCGT
GTCGAATACC TCCAAGCCCA ACATGAGGAC CTGACCGTTG CCCTACAGAC ACTTGAGGAT
GCCATCTCCA AAATCGACCG TGAAACCCGA GGCCGCTTTA AAGAGACCTT CGATCGCGTC
AACGCGGGGT TACAGACACT CTACCCCCGT TTATTTGGTG GCGGTCACGC CTACCTGGAG
CTGACCAGTG AAGATTTACT CGACACCGGC ATAGCGATCA TGGCCCGCCC CCCAGGCAAG
CGCGTCTCCA GCATCTCCTT ACTGTCTGGC GGTGAAAAAG CCATGACAGC AGTTGCACTT
GTGTTTGCCA TCTTCCAACT CAACCCCGCA CCCTTCTGCC TGCTCGACGA AGTGGATGCT
CCCCTGGACG AAGCCAATGT TGGGCGCTTG GCCAGCATGG TGAAAGAAAT GAGCGAGAAA
GTGCAGTTCC TGTTTGTCAG CCACAACAAA TCCACCATGG AAGCCGCCCA GCAACTGTCC
GGTGTCACCA TGCGTGAACC CGGAGTGAGC CGCCTAGTCA GCGTGGATTT GGCCGAAGCG
GCCCGTTTGG TTGACGGGAG CTGA
|
|---|
| Protein sequence | MRLSTIKLSG FKSFVDPATL HLPTNMTGIV GPNGCGKSNI IDAVRWVMGE SSASRLRGDS
LTDVIFSGSS ARKPVAQATV ELIFDNSDHT ISGEFAAFNE ISVKRTVSRD GSSVYSLNGT
KCRRRDITDL FLGTGLGPRS YSIIEQGMIS QIIEARPEDL RIYLEEAAGI SKYKERRKET
ESRIRHTQEN LDRLNDLREE IGKQLEHLKR QARQAEQYQT LQEERRVKDA ECKALQFREL
DTRLQGLRQA LLQEETRLQQ LLAEQREAEM RIETSRVRRE ESAEALATAQ ADVYQVGATL
ARIEQQIQHQ REMSQRLHKA RDEAQKQLID LTRHMGDDAA TLAVLREAVE NNEPQLHVLR
EQSEFKQDAL RDAEAALTDW QQRWDSHNRE TSEASRAGEV ERTRVDYLDR QTLDAERRRD
LLLAERAGLD LDALAEAFEQ IEVQYETQKA ALDGLNDQLE QRKQTLADVQ HQQRTAQTEL
ADVRKHAQTA RGRLSSLETL QQAALGQEQG AAMTWLQAHG LSSAARVGER IRVESGWENA
LESALGHMIE GVLVDDPQTL VEALNSLNEG HIALVADTQT QIQVAPTSLA AKVQGPVAIR
RLLTHLHGAE DLVAARALQA TLGEGDWVMT RNGECLGEGW LRVSRSGAAE QGALLRERDI
QTLRAQIETL QEREAELEHR LTHFRDHLLM AEQHREDAQR QLYIAHRGVS ELAGQRQAHH
GKLEASRGRI QHIEAEIAQL LETLDTSRDQ ARTARATLDE AVTRMGDLES QRQALHAERQ
QLNLTRDQAR EAARSVREAM HALALTLESQ RTQMVSLSQT LQRMDNQRGQ LDARLEELMN
QLSEGDSPVE ILEQQHQAAL SERVRTEHLL VQARTHLDGI DAELRQFEHT RQQRDEQALS
QRERISQCRL DQQALALGAE QRQAAVEKAG FVLQHLVDAL PEAANPADWE AAIEQLDIRI
RRLEPVNLAA IHEYNEAAQR VEYLQAQHED LTVALQTLED AISKIDRETR GRFKETFDRV
NAGLQTLYPR LFGGGHAYLE LTSEDLLDTG IAIMARPPGK RVSSISLLSG GEKAMTAVAL
VFAIFQLNPA PFCLLDEVDA PLDEANVGRL ASMVKEMSEK VQFLFVSHNK STMEAAQQLS
GVTMREPGVS RLVSVDLAEA ARLVDGS
|
|---|
| |