Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2040 |
Symbol | |
ID | 6203387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2284035 |
End bp | 2285780 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641703550 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001830712 |
Protein GI | 182682552 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.354299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGA ATACAAAAAC GTCTTCTTTG AACACCATGG CAATACGATT CAAACCATAT ATTCGATGGT GCCTGCTCCC ATTGATCGCA GCGCTGCTCC AACAACAGAG CGCATACGCC CAAGTCGCAC CACCCGATCA AGAATTGCTC CGCCAACAAG AACGTGAACG CGCACTCCGT GAACAACTGG AGCGCGGCAC CGATACCCGT TTACAAGAAG TACCGGGAAA AATCCCCTCC TTATTGCCAC ATGACGAAAC CCCCTGCTTC CCTATCCAGA AAATTTTTCT CGAAGGTGAC AAAGCCGCCC GCTTTCAATG GGCCTTGACC GCTGCCAACC CACCCCATGA TCCAGCTATC GGGCGTTGCC TCGGCACCGC AGGCATCAAC ATTGTTATCT CCCGCGTACA AAACGCCATC ATTTCCCGTG GCTACGTCAC CACACGCGTC CTTGCTACCC CACAAGACCT CAAAAGCGGA GAACTTCACC TCACCCTCAT TCCCGGCATA CTCGCCCACA TTCGTTTTGC TCCCGGCACC AAACCCGATG CCACTTTTTG GAACGCCATC CCCGCCCACC CTGGCGACCT ACTCAACCTG CGCGATATAG AACAAGGTCT AGAGAACTTC AAACGCGTTC CCACAGTCGA AGCGGATATC CAAATCGTTC CCACCGAAGG AGACAACTCT CAGCCCGGTC AAAGCGATTT ACTTATTTCC TGGACCCAAG GCCGCCCTGT CCGTTTCAAT GCCAGTTTTG ACGACTCAGG CAGCAAAAGT ACCGGCAAAA CCCAGGCTGG AGTCACTCTC TCTCTGGACC ATGCCCTGAC TCAAAATGAC CTCTTCTACA TCAGCCTCAA CCGTTCTGCC TTCAACGGCA GCAAACGCGG GACCCGAGGC ATCACCCTCC ATTACTCCAT GCCCTTAGGT AACTGGTTAA TCGCCGCCAC CCACAGCGGC TACAACTACC ACCAAAGCAT TGCAGGCAGC CAACAAACCT ATATTTACAG CGGTGAAAGC CATAACAGCG AACTCAAACT ATCCCGGCGC CTCATCCGTA CCGCCAGCAG CAAAAGCGGT ATCTACCTAC GTGGTTGGAC CCGTGACTCG AAAAATTTCA TCGACGATAC AGAAGTCCTC GTACAACGCC GTCGCATGGC AGGTTGGGAA ATGGGCCTCA CCTATCGCCG CTACATCAAT ACCGCAACAC TGGATACTAC TCTGGGTTTC CGGCGCGGTA CCGGTGCCTT TGGTGCATTA CCCGCCCCAG AAGAACTCTT TGATGAAGGC ACCTCCCGTC CCAAAATCTA CTTTGCTGAC TTACAGTTCA ACCTTCCCTT TCAACTGGGT CACCAATCCT TGCGCTATAC CGGTAGTTGG CGTGCCCAAT GGAACCGTAC CCCTCTGATT ACCCAAGACC GTTTTTCCAT CGGCGGGCGC TACACCGTCC GTGGCTTCGA TGGCGAAACT ACCTTGATCG GCGAGCGCGG CTGGCTGTTG CGTAACGATC TTGGGCTATC CCTTGGAGGC GGCCAAGAAG CGTACCTCGC CCTTGACTAT GCACACATCG GAGGGGCGTC GGCCTACTTA CAACAAGGCA ACCACCTTGC CGGTACCGCC TTGGGATTGC GTGGAGGCCA CCGCAGCCTA TTTTGGGATG TCTTCGTAGG CGCCCCAATC AACCGCCCAC GCACCTTCTC AAACGCCTAT ACCGTGACCG GATTCAGCTT GAACTGGTCC TTCTAA
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Protein sequence | MIQNTKTSSL NTMAIRFKPY IRWCLLPLIA ALLQQQSAYA QVAPPDQELL RQQERERALR EQLERGTDTR LQEVPGKIPS LLPHDETPCF PIQKIFLEGD KAARFQWALT AANPPHDPAI GRCLGTAGIN IVISRVQNAI ISRGYVTTRV LATPQDLKSG ELHLTLIPGI LAHIRFAPGT KPDATFWNAI PAHPGDLLNL RDIEQGLENF KRVPTVEADI QIVPTEGDNS QPGQSDLLIS WTQGRPVRFN ASFDDSGSKS TGKTQAGVTL SLDHALTQND LFYISLNRSA FNGSKRGTRG ITLHYSMPLG NWLIAATHSG YNYHQSIAGS QQTYIYSGES HNSELKLSRR LIRTASSKSG IYLRGWTRDS KNFIDDTEVL VQRRRMAGWE MGLTYRRYIN TATLDTTLGF RRGTGAFGAL PAPEELFDEG TSRPKIYFAD LQFNLPFQLG HQSLRYTGSW RAQWNRTPLI TQDRFSIGGR YTVRGFDGET TLIGERGWLL RNDLGLSLGG GQEAYLALDY AHIGGASAYL QQGNHLAGTA LGLRGGHRSL FWDVFVGAPI NRPRTFSNAY TVTGFSLNWS F
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