Gene XfasM23_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2033 
Symbol 
ID6203380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2274352 
End bp2274792 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID641703543 
Productfimbrial protein pilin 
Protein accessionYP_001830705 
Protein GI182682545 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.244331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC AACAAGGCTT CACTTTGATC GAGCTGATGA TCGTCATTGC GATCATCGCC 
ATCCTGGCAG CGATCGCTCT GCCCATGTAC CAAAATTATG TCGCCAGGTC TCAAGTCGCA
GCGGCACTAG CCGAGATCAC ACCGGGCCGA ACACAAGCCG AAATCCGTAT GGCTGATGGA
CAGGCTTCAA ACACTCCTAA CGCTATTGGA CTACGCAGCC CGACCACTCG TTGCAGCCTC
GTTGTGGTGG ACATCACAAC TACTGGCGGC GCAATCGTAT GTACGATGAT TGGTAATGGT
CAGGTCAACA ATCAAACTAT CACCTTGACC CGCATCGCTG ATAACAACGC AGGCCAAGGT
GGCGTCAATA CTGGGGGGAA CTGGACCTGC ACCACAACCG CGCCTGCAGC GTTAACTCCA
GCAGGCTGCA CTGGAACTTA A
 
Protein sequence
MKKQQGFTLI ELMIVIAIIA ILAAIALPMY QNYVARSQVA AALAEITPGR TQAEIRMADG 
QASNTPNAIG LRSPTTRCSL VVVDITTTGG AIVCTMIGNG QVNNQTITLT RIADNNAGQG
GVNTGGNWTC TTTAPAALTP AGCTGT