Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2033 |
Symbol | |
ID | 6203380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2274352 |
End bp | 2274792 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641703543 |
Product | fimbrial protein pilin |
Protein accession | YP_001830705 |
Protein GI | 182682545 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.244331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AACAAGGCTT CACTTTGATC GAGCTGATGA TCGTCATTGC GATCATCGCC ATCCTGGCAG CGATCGCTCT GCCCATGTAC CAAAATTATG TCGCCAGGTC TCAAGTCGCA GCGGCACTAG CCGAGATCAC ACCGGGCCGA ACACAAGCCG AAATCCGTAT GGCTGATGGA CAGGCTTCAA ACACTCCTAA CGCTATTGGA CTACGCAGCC CGACCACTCG TTGCAGCCTC GTTGTGGTGG ACATCACAAC TACTGGCGGC GCAATCGTAT GTACGATGAT TGGTAATGGT CAGGTCAACA ATCAAACTAT CACCTTGACC CGCATCGCTG ATAACAACGC AGGCCAAGGT GGCGTCAATA CTGGGGGGAA CTGGACCTGC ACCACAACCG CGCCTGCAGC GTTAACTCCA GCAGGCTGCA CTGGAACTTA A
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Protein sequence | MKKQQGFTLI ELMIVIAIIA ILAAIALPMY QNYVARSQVA AALAEITPGR TQAEIRMADG QASNTPNAIG LRSPTTRCSL VVVDITTTGG AIVCTMIGNG QVNNQTITLT RIADNNAGQG GVNTGGNWTC TTTAPAALTP AGCTGT
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