| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2030 |
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| Symbol | |
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| ID | 6203379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2270954 |
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| End bp | 2272345 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703540 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001830702 |
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| Protein GI | 182682542 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.419764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTGT TGAATGAAGA GCGCTTATGG GTGTGGTGCA CGAGCTTTTT AGATTTTGCT
GCTAGGGTTT CAGGAACAAG TTACCATGCG TCATCGGTCC GCTTGGGGAC GGTGGATGGG
AGAACAGCAT TGATATTTGC AACACGTACT GCGGTAAATG CTTCGCGTGC TGGGAATACC
AGCCCGCCGT TGACTTCGTT TCTTTGGGAA GGGACGGATA AGCGCGGTGT CAAAATCAAG
GGGGAACAGA CAGCACGCAC GGCGAACTTG TTGCGTGCTG AGCTACGTCG TCAAGGCATC
ACGCCTCTTG TGGTTAAGCC TAGGCCTAAG CCGCTGTTTG GTCAGGCAGG GAAGCGGATC
ACTCCGAAGG ACATTGCCTT TTTTAGTCGC CAGATGGCGA CGATGATGAA AGCCGGTGTC
CCCATTGTCG GGGCGTTGGA TATTTTGGCC AACGGTCAGA AGAATCCGCG TATGCGTACG
ATGGTCAATC AAATTAAAAA TGATATTGAA GGCGGCTCCT CGCTGTATGA GTCAATCAGC
AAGCACCCTG TATATTTCGA TGAGCTTTAT CGCAATCTGG TCAGGGCTGG TGAGCGCGCG
GGCGTGCTGG AGACGGTGCT TGATACGGTT GCTAGTTATA AGGAGAACAT TGAGGCTCTG
AAGGGAAAAA TTCGCAAGGC GTTGTTTTAT CCTGTTGCTA TTGTCGCGGT TGCTCTCATT
GTTAGTTCGA TTTTATTGAT ATACGTGGTG CCGCAGTTCG AGGATGTGTT CAAAGGATTC
GGAGCGGAAT TGCCTGCATT CACTCAGATG ATTGTCAATT TTTCCAACTT TATGCAGCGG
TGGTGGTGGG CCATGTTGGC TCTGCTGATT GTTGTTATCG GTGGTGGTTT GTTTACTTAC
AAGCGCTCTG AATCCATGCA ACATCTGTTG GATAGGTTGG TGTTGAAGTT CCCGGTGATC
GGGGCAATTA TGCACAATAG CGCGCTTGCT CGGTTCTCGC GAACAACAGC TGTTACTTTC
CGTGCAGGGG TGCCACTGGT AGAGGCATTG GGTATCGTTG CTGGGGCAAC CGGCAATAAG
GTTTATTCGG ATGCTGTGTT CCGCATGCGT GATGATGTTT CAGTTGGCTA TTCTATAAAT
ATGTCAATGA GGCAAGTTGG TATCTTCCCT CATATGGTGG TGCAGATGGC TTCCATCGGT
GAGGAAGCCG GTGCTCTGGA CGCGATGCTG TTTAAAGTCG CTGAGTACTA TGAACAGGAA
GTCAGTAACG CGGTCGATGG ACTCAGCAGT TTGCTGGAAC CGCTGATCAT GGTCTTTATT
GGTGTTATCG TCGGCGGCAT GGTCATTGCT ATGTATTTGC CGATCTTTAA GCTTGCTTCT
GTCGTTGGAT AA
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| Protein sequence | MGVLNEERLW VWCTSFLDFA ARVSGTSYHA SSVRLGTVDG RTALIFATRT AVNASRAGNT
SPPLTSFLWE GTDKRGVKIK GEQTARTANL LRAELRRQGI TPLVVKPRPK PLFGQAGKRI
TPKDIAFFSR QMATMMKAGV PIVGALDILA NGQKNPRMRT MVNQIKNDIE GGSSLYESIS
KHPVYFDELY RNLVRAGERA GVLETVLDTV ASYKENIEAL KGKIRKALFY PVAIVAVALI
VSSILLIYVV PQFEDVFKGF GAELPAFTQM IVNFSNFMQR WWWAMLALLI VVIGGGLFTY
KRSESMQHLL DRLVLKFPVI GAIMHNSALA RFSRTTAVTF RAGVPLVEAL GIVAGATGNK
VYSDAVFRMR DDVSVGYSIN MSMRQVGIFP HMVVQMASIG EEAGALDAML FKVAEYYEQE
VSNAVDGLSS LLEPLIMVFI GVIVGGMVIA MYLPIFKLAS VVG
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