| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2029 |
|---|
| Symbol | |
|---|
| ID | 6203378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2270084 |
|---|
| End bp | 2270947 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641703539 |
|---|
| Product | peptidase A24A domain-containing protein |
|---|
| Protein accession | YP_001830701 |
|---|
| Protein GI | 182682541 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.250506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTC TTGATCAGCA CCCCGGACTC GGCTATCCCC TTGCGTCCGG TTTGGGGTTG
TTGCTTGGTA GTTTTCTCAA TGTGGTGATC CTGCGTTTGC CGCGCCGTTT GGAATGGCAA
TGGAAGCGCG ATGCGCGCGA AATCCTGGAA ATGCCGGACA TTTATGATCC GCCACCGCCG
GGAATTGTGG TCGAGCCTTC CCACGATCCA GTGACTGGTG ATCGGTTGAA GTGGTGGGAA
AACATTCCGG TGCTTAGCTG GTTGTTGCTA CGTGGACGTT CGCGTTACAG CGGCAAGTCA
ATCTCGTTGC AGTATCCGTT GGTCGAATTG CTGACTTGCC TGCTGGTGCT GGCCAGTGTT
TGGCGTTTTG GATTCGGTTG GCATGGTTTT GGGGCAATTG TGTTCAGTTG TTTCCTGGTT
GCGTTGGCTG GGATTGATTT GCGTACTCGG CTCTTACCTG ACCAGTTAAC TTTAATGCTC
ATGTGGCTGG GTTTGATTGG ATCGGCGGAT AACTTGTTTA TGGCAGCCAA ACCTGCGTTA
TTGGGGGCTG CAGTTGGTTA TTTATCTCTG TGGATTGTGG CGGCGTTGTT CAAACTGATC
TTTAACAAGG AAGGGATGGG CCATGGTGAC TTCAAAATGC TGGGCGCGCT TGGGGCATGG
TGTGGGTTAA AGGGTATTCT CCCGATCATT TTGATTTCAT CACTGGCTGG AGTGGTATTG
GGCTCTGTTT GGCTTGTTGT GCGTGGTCAT AACCGTACGA CGATGATTCC GTTTGGACCT
TATCTGGCAG TTGGTGGATG GATCGTGTTC TTTTTCGGCG ATCAGATCAT CCATGCTTAT
CTGGAGCTAT TAAGTATCGG GTGA
|
|---|
| Protein sequence | MAFLDQHPGL GYPLASGLGL LLGSFLNVVI LRLPRRLEWQ WKRDAREILE MPDIYDPPPP
GIVVEPSHDP VTGDRLKWWE NIPVLSWLLL RGRSRYSGKS ISLQYPLVEL LTCLLVLASV
WRFGFGWHGF GAIVFSCFLV ALAGIDLRTR LLPDQLTLML MWLGLIGSAD NLFMAAKPAL
LGAAVGYLSL WIVAALFKLI FNKEGMGHGD FKMLGALGAW CGLKGILPII LISSLAGVVL
GSVWLVVRGH NRTTMIPFGP YLAVGGWIVF FFGDQIIHAY LELLSIG
|
|---|
| |