Gene XfasM23_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2005 
Symbol 
ID6203359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2243773 
End bp2245263 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content62% 
IMG OID641703515 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001830678 
Protein GI182682518 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTC CTTTTGCGCT CTATGACACT GCCGCTGCAG CTGCGCTTGA TGCACGGCTG 
GCCGCGCACT TGGGTGATGA TGGTGATCTG TTGATGCAGT GCGCTGGCCG TGCTGCATGG
GATCTGTTGC GCCAGCGTTG GCCAGATGCC CGTCAGGTGC TGGTGGCATG CGGTACTGGC
AACAATGGCG GCGACGGCTA TGTACTCGCC TGCTTGGCGC ACCGCGCCGG CTTGCAGGTA
CAGGTGGTGC ACTTGCCCGG GTGTGGTCCG GCGTCGTTGC TGGCGCAGCG TGCTTATGAT
GCGTACCTTG CCGCAGGTGG TCAGGTGATG CTGTTCTCAG GGGTACTCGA GACGGCGGAT
GTCTTGGTGG ATGCCCTGTT TGGCATTGGT TTGAATCGAC CCTTGGACGT GCCGACGCAA
GGTTTAATCA ATGCACTGAA TGCGGCTGGT CGGCCGGTGT TGGCGTTAGA CGTTCCTAGT
GGCGTTGATG CCGAACGTGG CGCTGTATTT GGTACGCCCG TATGCGCGCA TGTCACGCTG
CAATTCATGG TGCCTCATGT GGGTTTGTAT ACAGGCCCAG CATTGGATGC CGTGGGCGAG
CGTGTACTGG CTGCGCTTGA TGTGCCGCCA GCACTACGGG ATGCGCTGCC ACCTTGTGCT
GAGCGATGGG GGCCACAGAG ACTGGCATCC CTGTTCCGTT CGCGGCGTCG TAACAGCCAC
AAAGGTGAGT TTGGGCGTGT GTTGTGTGTG GGCGGTAATT GGGGGAGCGG TGGAGCAATC
ATGTTGAGTG CCGAGGCCGC ATTGCGCAGT GGTGCCGGTG TGGTACACGT GGCGACGCGT
GAAGCACATG TTGCCCCCTT GCTGGCGCGT TGTCCGGAGA CAATGCCGCG CGGTGTTGCC
GGAAGTGCCG AGCTGATGCC GTTGTTGACC GCAGCCGATG TTGTTGCGCT TGGGCCGGGG
TTAGGACAGG ACTCGTGGGG CCAAGCGTTA TTGGCAGCCA CCCTCGACAG TGGGTGTGCC
CTGGTGATTG ATGCCGATGC CTTGAATGTG TTGGCTGCGG CGCCAGGTCC CCTGCCACCT
GGTGCAATCT TGACGCCGCA TCCGGGCGAG GCCGGCCGTT TGCTTGGCTG CACGACGGCT
CAGGTGCAGG CGGATCGTCG CGCAGCTGCG CAGGCCTTGG CGGCGCGTTT TGCTGCTGTG
GTGGTGCTGA AGGGGGCGGG CAGTCTTATT GCCGCGCCGG GTTGCTTACC GTGCGTGATT
GATGCCGGTA ATCCCGGCAT GGCGGTTGCT GGGATGGGTG ACGTACTCAC TGGTGTCATT
GCCGCGTTGC GTGCCCAAGG CGAGAGCGCG TTCGATGCGG CATTATTTGG CGCGTTGTTG
CATGCTGCTG CTGGTGACCA GGTGGCGCGT GATGGGGGGG AACGTGGTTT GCTGCCTAGC
GATGTCCTGC CGGTACTACG TCGTTTGATC AACCCGGATT CTGCGCCGTG A
 
Protein sequence
MSAPFALYDT AAAAALDARL AAHLGDDGDL LMQCAGRAAW DLLRQRWPDA RQVLVACGTG 
NNGGDGYVLA CLAHRAGLQV QVVHLPGCGP ASLLAQRAYD AYLAAGGQVM LFSGVLETAD
VLVDALFGIG LNRPLDVPTQ GLINALNAAG RPVLALDVPS GVDAERGAVF GTPVCAHVTL
QFMVPHVGLY TGPALDAVGE RVLAALDVPP ALRDALPPCA ERWGPQRLAS LFRSRRRNSH
KGEFGRVLCV GGNWGSGGAI MLSAEAALRS GAGVVHVATR EAHVAPLLAR CPETMPRGVA
GSAELMPLLT AADVVALGPG LGQDSWGQAL LAATLDSGCA LVIDADALNV LAAAPGPLPP
GAILTPHPGE AGRLLGCTTA QVQADRRAAA QALAARFAAV VVLKGAGSLI AAPGCLPCVI
DAGNPGMAVA GMGDVLTGVI AALRAQGESA FDAALFGALL HAAAGDQVAR DGGERGLLPS
DVLPVLRRLI NPDSAP