| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1972 |
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| Symbol | |
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| ID | 6203325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2212422 |
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| End bp | 2213828 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641703481 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001830645 |
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| Protein GI | 182682485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.737809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTA TGCCACTTTC GTTAATTGCG TACTGGACCG GTGGTTATCT GCACGGTGAG
GATGTCAGGG TGTGTGCAAT TGGTCATGAC ACCCGTGCGC TGGATGTTGG CGTGTTGTAT
GTGGCGTTGC GAGGCCAGCG TTTCGATGCG CATCTATTCT GCGCCGAAGC GGTGGCACGT
GGTGCGGCGG GGGTATTGGT TGATCACGTC TTGCCAGAGT TGGATGTTCC TCAGGTCGTT
GTGGCCGATA CTGAGCGCGC GCTTGCGGCG ATTGCTTCAG CCTTGCAGCG TGACCGGACA
TCTTTTGTGT TGGCATTGAC TGGGTCCAAT GGAAAAACCA GTGTTAAGGC AATGCTTGTA
TCCATTTTGG AGCATGCTGC GGCACAGAGT AGTACGGTGG TCTATGCGAG TTCTGGTAAC
TGCAACAATG AGATTGGCCT GCCGTTGGCA GTGATTGCCG CGCCCGATAA TGCCGATTTT
GCGGTGTATG AGATGGGTGC GGGCAAGTTG GGCGACATCG GTTATTTGAC TGACATCGTT
ACGCCGGATG TGGCGTTGGT TAATAACATC GCACCGGCGC ACTTGGAGCG CATGGGGAGC
TTGCTTGGTG TGGCGCGTAC CAAAGGTGAG ATCTATGCCG CGTTGCGGCC TGGTGGTACT
GCTGTGATCA ATATGGATGA TGCGTTTGCT TTGTGGTTTG AGCAGCAGTG TGTTCCGGCT
GGTTGTGCTG TGTTGCGGTT CGGTTTGCAG GCAACTGCTG ACGTTACTGC GTATAGCCTG
CAATTCAGTG AGGACAGTGT GCGTTTTGTA CTTGTGACGC CACAGGGGGA GGTGCCGGTG
TGCTTGGCGC TGTCTGGGCG TCACAATGTG TGTAATGCGC TGGCAGCGGC AGCAATGGCG
TTGGTTGCTG GTATTCCTTT GTCGCAGATT GCGGCTGGTC TTGGTTTGGC TCGGTCGGTG
GCCGGTCGCC AAGTTGCGCA TGCTTTACCC GGTGGTGCGG TATTGATTGA TGATAGTTAC
AACGCCAATC CTGGGTCGCT GGATGTGGCA ATCGATACGT TGACGGCTGC TTCCGGCCCA
GGATGGTTGG TGCTTGGCGA TATGCTCGAG CTTGGTTTGG AGGGGGTGGC GCTGCATGCC
GCTGCTGGAC GTCGTGCACG TCAAGCCAAA GTAGCCCGTT TATATGCACT GGGTGAGTTG
AGTGCAGTTG CAGCGCGGGA GTTTGGTGAG GGTGGACATG TGTTTGCCGA TCATGATGCG
TTGGCTGCGG TGTTGTGGGA TGACTTGATG CATGTACCAG GTGGGGTGCC GCCGCGGGTG
CTTGTGAAGG GGTCGCGGGG TAGTGCGATG GACAAAATTG TGGGCGCTCT GTTGTCGAGT
GCGGAGGGCG TAGCGCATGT TGTTTGA
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| Protein sequence | MRSMPLSLIA YWTGGYLHGE DVRVCAIGHD TRALDVGVLY VALRGQRFDA HLFCAEAVAR
GAAGVLVDHV LPELDVPQVV VADTERALAA IASALQRDRT SFVLALTGSN GKTSVKAMLV
SILEHAAAQS STVVYASSGN CNNEIGLPLA VIAAPDNADF AVYEMGAGKL GDIGYLTDIV
TPDVALVNNI APAHLERMGS LLGVARTKGE IYAALRPGGT AVINMDDAFA LWFEQQCVPA
GCAVLRFGLQ ATADVTAYSL QFSEDSVRFV LVTPQGEVPV CLALSGRHNV CNALAAAAMA
LVAGIPLSQI AAGLGLARSV AGRQVAHALP GGAVLIDDSY NANPGSLDVA IDTLTAASGP
GWLVLGDMLE LGLEGVALHA AAGRRARQAK VARLYALGEL SAVAAREFGE GGHVFADHDA
LAAVLWDDLM HVPGGVPPRV LVKGSRGSAM DKIVGALLSS AEGVAHVV
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