| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1968 |
|---|
| Symbol | murC |
|---|
| ID | 6203322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2207487 |
|---|
| End bp | 2208920 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641703477 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_001830641 |
|---|
| Protein GI | 182682481 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0316215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCGTC GTCTTCAAGA CAATGGCGAT TTGATCCGTG CTTTCCCACG TGTGCATTTT
GTGGGTATTG GTGGTGCTGG GATGACGGGT ATTGCTGAGG TGATGTTGAC GTTGGGTTAC
GAGGTATCCG GTTCTGATAA TGCCGATAAT GCCGCGACTC GACGTTTAGC GACACTGGGT
GCACGGGTGA TGCGTGGTCA TTCAGCAGCT AATGTGCTTG GTACAGATTG TGTGGTGGTA
TCAAGTGCGA TTCGCGAAGA TAACCCGGAG TTGATGGAGG CGCGTAGTCA GCGTATTCCA
ATTATGCCGC GTGCGGCGAT GTTGGCTGAG TTGATGCGTT TTCGCCACGG TATTGCTGTT
GCCGGTACAC ACGGTAAGAC AACGACGACG AGTTTGATTG CGGCAGTGCT CAGTGAGGGA
GGGTTAGATC CGACGTTTGT CATTGGTGGT CAGTTGCTTG CTGCTGGTGC TAACGCCAAG
CTCGGCGCTG GTCAATGGTT GGTGGTCGAG GCGGATGAAA GCGATGGCAG TTTTCTGCGT
TTGAATCCGC TTGTGGCGGT GGTTACCAAT ATTGATGCTG ATCATTTGGA AAATTATGGG
AATGATTTTT CCAGGATAAA AGATGCGTTT ACGGAGTTTT TGCAGCGTCT GCCGTTTTAT
GGGTTGGCAT TGTTGTGCCT TGATGATCCA GAGGTGGCCG AGTTGGTGGG CAAGGCGAGA
CGTCATGTGA TGACTTATGG GATTGATGCT GCTGCTGATG TGCGTGCCGA AGATGTGGTT
CAAGATGGTG CACGGATGTG TTTCACGCTG TGTCTTCCTG AGGGCAAGGT TATTCCGGTG
ACGCTGGCGT TGCCGGGGCG TCATAACGTA CTCAATGCGT TGGCTGCTTC TGCGGTCGGG
TGGCAGTTGG GTGTGCCGCC AGAGGTGATT GGGCGTGCAT TGAAGAGTTT TGTTGGTATC
GGGCGTCGCT TCAATGATTT GGGGGATGTC GCTATTGGAA ATGGTGCATG TGTTCGTTTG
ATTGATGATT ACGGGCATCA TCCGCGTGAG TTAGAGGCGG TGTTTGCAGC TGCGCGAGGG
GGGTGGCCGG ATAAGCGGTT GGTGGTTGCG TTTCAGCCGC ATCGTTACAG TCGTACTCGC
GATCAGTTTG ATGCGTTTGC TGCGGTGTTG AGCAGTGTTG ATGCGCTGGT ATTGAGTGAG
GTTTATCCGG CTGGTGAAGT GCCGATCCCG GGGGCTGATG CTAAGGCGCT GGCGCGTGCG
ATCCGCGCGC GGGGACGCAG TGAGCCTGTC GTGGTGGGTC AAGTGGCTAG TTTGATTGAT
GTGTTGCCGG ATGTGTTACA GGAGGGGGAT TTGCTGTTGA TGATGGGTGC TGGCGATATT
GGTTCCATCG CGCAGCGGAT TGTTCATGAT GGTTTTGTCT TTGGAGAGGT TTAA
|
|---|
| Protein sequence | MIRRLQDNGD LIRAFPRVHF VGIGGAGMTG IAEVMLTLGY EVSGSDNADN AATRRLATLG
ARVMRGHSAA NVLGTDCVVV SSAIREDNPE LMEARSQRIP IMPRAAMLAE LMRFRHGIAV
AGTHGKTTTT SLIAAVLSEG GLDPTFVIGG QLLAAGANAK LGAGQWLVVE ADESDGSFLR
LNPLVAVVTN IDADHLENYG NDFSRIKDAF TEFLQRLPFY GLALLCLDDP EVAELVGKAR
RHVMTYGIDA AADVRAEDVV QDGARMCFTL CLPEGKVIPV TLALPGRHNV LNALAASAVG
WQLGVPPEVI GRALKSFVGI GRRFNDLGDV AIGNGACVRL IDDYGHHPRE LEAVFAAARG
GWPDKRLVVA FQPHRYSRTR DQFDAFAAVL SSVDALVLSE VYPAGEVPIP GADAKALARA
IRARGRSEPV VVGQVASLID VLPDVLQEGD LLLMMGAGDI GSIAQRIVHD GFVFGEV
|
|---|
| |