| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1967 |
|---|
| Symbol | ddl |
|---|
| ID | 6203321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2206522 |
|---|
| End bp | 2207484 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641703476 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_001830640 |
|---|
| Protein GI | 182682480 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000254256 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATGA GCATATTTTC ACTGTCTCCA CGGTATACGG ATCCGGCGGT GTTTGGTCGT
GTTGCAGTGT TATTAGGGGG GACGTCTGCT GAGCGTGAGG TGTCTTTGCT TTCAGGTCGT
AATGTGTTGG AAGTATTGCG CATGCGCGGT GTTGATGCTC AGTCGGTAGA TGGGGTTCCG
GCACTCGCTC AGGCGCTGGT GGAACGGCGT TTTGATCGTG TGTTCAATGT GTTGCACGGT
CATAATGGCG GTGGTGAGGA TGGTGTGGTG CAGGGGTTGA TGCAGGCTTT TGGTGTGCCG
TATACAGGTT CGGATGTGCT TGGTTCAGCG TTGAGTATGG ATAAGGTGCG CACTAAACAG
GTTTGGCTTG CGCTGGGTTT GCCGACGCCG CGTTATGCGA GTTTGAGTGT GTGTGCCACT
GCTGTTGAGG TGCGTAAGGC GGTTGAGATG CTAGGTTTTC CGGTGATTAT TAAGCCGGCT
AAAGAAGGGT CTAGTGTTGG TGTCAGTCGT GTGTTTGCAC TGGAGCATTT GGAGGAGGCG
GTTGCTTTAG CGGCGCGTTA CGAGGGTGAG TTGCTGATGG AGCAGTTGAT CGAAGGGGAT
GAATTGACGG TGTCGATTCT TGATGAAATG GCGTTGCCCT CAATTCGGAT CGTTCCTCAG
GGGCAGTGGT ATGACTATAA CGCGAAGTAT CTTGCTGAAG ACACGCAGTA TGTGTGCCCG
GGTTTGGATG ATGTTGCTGA GGCTGAAATC GCTCAACTTG CGTTGGCTGC ATTCCATAGT
GTTGGTTGTC GTGGTTGGGG TCGTGTGGAT GTGATGCGCG AGCGCGGCAG TGGGCGCTTT
TTCTTATTGG AAGTCAATAC TGCTCCTGGA ATGACGACTC ACTCGTTAGT GCCAAAGGCA
GCGAGTCAGT TGGGTATGGG TTTTGATGAT TTGGTGTGGC GGATTCTGGA GCAGACTTTA
TGA
|
|---|
| Protein sequence | MGMSIFSLSP RYTDPAVFGR VAVLLGGTSA EREVSLLSGR NVLEVLRMRG VDAQSVDGVP
ALAQALVERR FDRVFNVLHG HNGGGEDGVV QGLMQAFGVP YTGSDVLGSA LSMDKVRTKQ
VWLALGLPTP RYASLSVCAT AVEVRKAVEM LGFPVIIKPA KEGSSVGVSR VFALEHLEEA
VALAARYEGE LLMEQLIEGD ELTVSILDEM ALPSIRIVPQ GQWYDYNAKY LAEDTQYVCP
GLDDVAEAEI AQLALAAFHS VGCRGWGRVD VMRERGSGRF FLLEVNTAPG MTTHSLVPKA
ASQLGMGFDD LVWRILEQTL
|
|---|
| |