| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1962 |
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| Symbol | lpxC |
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| ID | 6203307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2201650 |
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| End bp | 2202591 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641703471 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001830635 |
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| Protein GI | 182682475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000362749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCATT TTTTCAGACT TCCTCCTATG AGCCAGCAAC GTACCCTTAA CAACACGATT
CGCGCGACTG GCGTTGGTCT GCACAGCGGC AATAAGATCC ATATTACCCT CCGTCCTGCT
CCGGTCAACC ACGGTATCGT GTTCCGGCGC GTGGACCTGG ATCCTGTGGT TGAAATCCCT
GCTAGTGGGG ATTTGGTGAC CGAGGTGATC TTATGCACTG GTTTGACGCG CAATGGGGCT
AAAGTACAGA CGGTCGAACA TTTGATGTCA GCCTTTGCTG GGCTTGGTAT CGACAACGCT
ATTGTGGATC TGTCGTCGGC TGAGTTACCG ATTATGGATG GGTCTTCTGC GCCGTTTGTA
TTCCTGTTGC AGTCGGCGGG TATCTTAGAG CAGAACGCTG CTAAGCGTTT CATCCGTATT
AAGCGTTCTG TGGAGGTGCG CCAAGGGGAT AAGGTGGCCA AGTTTAGCCC TTACGATGGT
TATAAATTGG GTTTTACCAT TGAGTTCGAT CATCCAATGA TCCCGCATAA ACAGTCGTAT
TATGAGATGG AGTTTTCTAC TGCGGCTTAT ATCAAGGAAA TTTCTCTGGC GCGTACTTTT
GGTTTTATGC ATGACTTGGA AGATATGCGT GAGCGTAACC TTGGACTTGG CGGTTCAATG
GACAATGCGA TCTTGCTGGA CGACTTCCGT GTGCTCAATG AGGATGGCTT GCGCTATGGC
AACGAGTTCG TGCGTCACAA AATACTTGAT GCAATCGGTG ATCTTTACTT AATTGGTGGC
CCGATTTTGG GGGCTTATGA GGCATTTAAG TCTGGTCATG CGCTGAACAA TAAGCTGGTT
CGTGCTGTAC TTGCCGATGA GACTTCTTGG GAGTGGATCA GCTTCCCTAG TCCAGCCGCT
GAGCAGCCGC CTGTCGTCTA CACGCATCCC GCTTGCATTT GA
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| Protein sequence | MLHFFRLPPM SQQRTLNNTI RATGVGLHSG NKIHITLRPA PVNHGIVFRR VDLDPVVEIP
ASGDLVTEVI LCTGLTRNGA KVQTVEHLMS AFAGLGIDNA IVDLSSAELP IMDGSSAPFV
FLLQSAGILE QNAAKRFIRI KRSVEVRQGD KVAKFSPYDG YKLGFTIEFD HPMIPHKQSY
YEMEFSTAAY IKEISLARTF GFMHDLEDMR ERNLGLGGSM DNAILLDDFR VLNEDGLRYG
NEFVRHKILD AIGDLYLIGG PILGAYEAFK SGHALNNKLV RAVLADETSW EWISFPSPAA
EQPPVVYTHP ACI
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