| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1956 |
|---|
| Symbol | |
|---|
| ID | 6203898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2192688 |
|---|
| End bp | 2193344 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641703465 |
|---|
| Product | putative periplasmic ligand-binding sensor protein |
|---|
| Protein accession | YP_001830629 |
|---|
| Protein GI | 182682469 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.901349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAT ATGAACAAAA GCTTCTTGAT GACTTTTTGA CACGACTGCG TGGTGCCGGA
GAAAGCGTAA AAGATCCTCA AGCCGAAGCG CTTATCTGCG AGCGCCTCGC TGGCCATCCT
GATGCAGCCT ATCTCCTGGT GCAGCGCGCA TTATTGCTTG AACAAGCCTT GGCCTCAGCG
CAAACCCAGA TTGCAAAGCT GCAGCAAGCC GCTGCCGGAC ATGATGCGGG TGCTGGCAGT
GGCAGTTTCC TCGGCCAAGC CGCTTGGGGA ACGCAGCAGA CCGTCCCACC CACAGTCGCT
CCCCCGCCTC CTCCCGCAGC ACCTCCGAGC TGGCGTGAGC GTCTGTTTGG GAGTACTCCA
GCGCCAGTGC AGCAAGCGGC GCCCTCGGCT GCAAGTAGCT TCCTCGGTAC TGCTGCCAGT
ACGGCGGCGG GTGTTGCCGG TGGAATGTTT CTGTTTCAGG GCTTGGAACA CATGTTCGGT
GGTCACCAAG GCCAAAGCGG TGGACTCTTT GGTAATGCTG ACAACACACC ACAACAGACC
ATCGTTGAGA ATGTTGTCAC TAACAACTAC TACGACACCG GCACATCCAT AAGCGATGCG
GGCGGTTTCG CTGACGATAC CGATCTATTC GACAACGATA ACGATACCTG GGTGTGA
|
|---|
| Protein sequence | MTPYEQKLLD DFLTRLRGAG ESVKDPQAEA LICERLAGHP DAAYLLVQRA LLLEQALASA
QTQIAKLQQA AAGHDAGAGS GSFLGQAAWG TQQTVPPTVA PPPPPAAPPS WRERLFGSTP
APVQQAAPSA ASSFLGTAAS TAAGVAGGMF LFQGLEHMFG GHQGQSGGLF GNADNTPQQT
IVENVVTNNY YDTGTSISDA GGFADDTDLF DNDNDTWV
|
|---|
| |