| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1941 |
|---|
| Symbol | |
|---|
| ID | 6203265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 2171663 |
|---|
| End bp | 2173099 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641703450 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001830614 |
|---|
| Protein GI | 182682454 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCCA ACGTTCTGTT CCCCTTATTT GCCAACCTAC ACGACCGCGC CGTCCTGGTG
GTCGGCGGCG GTAAGGTTGC AGAACGCAAG ACAGAGGCAT TACTCAAAGT GGGCGCCTTG
CCGATTATCG GCGCCCCCTC TCTGACCGCA TCGTTACAGC GCTGGGCCGA AACCGGTCGC
ATCACGTGGC GGCAAGGGAC GTTTGAAAAC AGCTGGCTGC AAGAAGATAT TTGGTTGGTC
ATCGCCGCCA CCGATCAACC CGAGGTGAAC CACGCCGCGG CGCGCGCAGC ACATGCGCAA
CGGTTATTCG TCAACGTGGT CGACGACATT GCACTCTCCA ACGTGCAGGT CCCGGCCGTG
GTCGAACGCG GCCCGTTGCG GATCGCGATT TCTAGCGGCG GTGGCGCACC GATGGTGGCA
CGCTATCTGC GACAACAACT GGAAAGCCTC ATTGACGATA GTTGGGGACG ACTGACCACA
CTGTTCGCGC AACGCCGCGA CACTATCCGC GCCCGCTATC CAAACATAGA AGCACGCCGC
CGCTTCTTTG AAACCCAACT CGCCGGCCCA CTCCAACGAT TGCTACGCAA GCAACGCCAC
GCAGAGGCCG AAGCAGTGCT GGAAGCAGCA CTCGCCAAGA CTCCCCCCAC GGAGTCCGGC
AGCGTCACCC TGGTGGGCGC TGGCGCCGGC GACGCCGGGC TACTGACCTT AAATGCACTG
CGCGCCTTGA ATGAAGCCGA CATCATCCTC TACGACCGCC TGGTCAGCGA CACCGTGTTA
CAGATGGCAC GGCGCGATGC GGAGCAGATC GAAGTAGGCA AATCCGCAAC GGGCCACAGT
GTGCGCCAAG AAGACATTCA CACCCTGATG CTGCAACACG CCCGTGCTGG TCAGCGTGTC
GTACGGCTGA AAGGTGGCGA TCCATTCGTC TTCGGTCGTG GTGGCGAGGA ACTGGAATTC
TTACGTACCC ACGGCATCCC CTATGAGGTC ATCCCCGGAA TCACCGCCGC CCTTGCCTGT
GCCGCCTATG CGGGTATCCC CTTGACCCAC CGCGACCACG CCCAATCGCT ATGCCTGATC
ACCGCCCATT GCCAATCCTC CCTAGATACC CTGAACTGGG CTGCACTGGC ACAAGAACGT
CAAACGCTGG CGTTCTACAT GGGCGTGGCG GGACTACCCA CCATACAGCA ACGCCTGTGT
GAGGCTGGAC GGACCGAAAC AACGCCTTTT GCACTGATCG AAAATGGCGC ACGCGCGCAA
CAGCGGGTGC TCACAGGAAC GCTGAAAACA CTCGCGCACA CCGCACAGAC ATACGCCGTG
CGTCCCCCCG CACTGCTGAT CCTCGGCGAA GTCACCGCGC TGGCCGAACA CCTGCATTGG
TTCGGCACCA CACCATTATC TGCCCCATGC CCCCCACGCA CGCATCCTAT AAGCTGA
|
|---|
| Protein sequence | MTANVLFPLF ANLHDRAVLV VGGGKVAERK TEALLKVGAL PIIGAPSLTA SLQRWAETGR
ITWRQGTFEN SWLQEDIWLV IAATDQPEVN HAAARAAHAQ RLFVNVVDDI ALSNVQVPAV
VERGPLRIAI SSGGGAPMVA RYLRQQLESL IDDSWGRLTT LFAQRRDTIR ARYPNIEARR
RFFETQLAGP LQRLLRKQRH AEAEAVLEAA LAKTPPTESG SVTLVGAGAG DAGLLTLNAL
RALNEADIIL YDRLVSDTVL QMARRDAEQI EVGKSATGHS VRQEDIHTLM LQHARAGQRV
VRLKGGDPFV FGRGGEELEF LRTHGIPYEV IPGITAALAC AAYAGIPLTH RDHAQSLCLI
TAHCQSSLDT LNWAALAQER QTLAFYMGVA GLPTIQQRLC EAGRTETTPF ALIENGARAQ
QRVLTGTLKT LAHTAQTYAV RPPALLILGE VTALAEHLHW FGTTPLSAPC PPRTHPIS
|
|---|
| |