Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1922 |
Symbol | |
ID | 6203392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2141429 |
End bp | 2143105 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641703432 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001830596 |
Protein GI | 182682436 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAGTA CGTTGTCCGG TGCCGATCAG TTTCGGGGTC CATGGTGGCT ACTACAAGTT TTATCTAGTA CGGATTTTCT TTTGGACATA TCGCCTCCGC TTGTCCTGCA GTCACTCGAC ATCCCATCGG ATGTCTACCG GGAGATGCTG TGTACCCTTG AGGCTGGCTT TTGCATCGTG CAGATAGTGT TGGATGACGG TCAACCGGTT GACGGTATAT TCCGTTTGAC CAATGCCAGC TTTGGTCGCC ATCTCCGGCT TGATTCGGTG GTTGGGGAGT CCGTGTGCGG CATCATGCCT GACGATGGGC CGGAATACAT TAAGCGTTAT GGTGGGGTTG CGTTGTCTGG GCAGCGGGTT CACTTCGAGG CGCGGGCGTT GCGCCGTTGG TATTCGGTGG AAGTGATGCG TGTTGGAGCG CCGGAGGGGC GATTGCTTGG GGTTCTATTT GTGGATATCA CCGAGCACAA GCGTATGGAA CGTAGGTTGG CCGAGAGCGA GGTGCGTTTC AATATTTTGG CTGATGGTTT GCCGATGCCC GTTTGGGTAT TTGATGCACA AGGAGGGATG CGGTTCGTCA ATACTGCGTA TGGGGAGTTC TTCGGTGTCG ATTTGAGCAG TGGCACGCTT CCAGAGTGGA GTATGGTGCT GCATCCGGAG GATGTGCTGA TATTCGAGTT CAAGTTGAGT GCGGCGCTGA AGACGCAGAG TGCGCTTCGT GCGTTGGTAC GGGCACGTCG TTATGACGGG CAATGGCGTT GGATTGAAAT GAGTGCCACG CCGCGTTATT CGCCGGATGG TCACTTCATC GGTCTGACGG GGAGCAGTCA GGATGTGACG GAGCGTCTTG AGATTGAGTT GGCGCGTGAG CAGTTGCTGA AATCCGAGCG TGCGGCGCGC AATGAGGCCG AGAATATGGC GCGATTGAAG GATGAGTTTC TGTCCACGCT TTCGCATGAG TTACGTACCC CGTTAACGAC GATTTTGGGT TGGAGTGAGT TGTTGTTGCA ACGCATTGAG GAGCAGCATC CTTGTTACAA AGGGTTGTCG GTGATTGCTA GCAGCGCCAA GGTTCAAAAG CGTTTGATTT CGGATATGTT GGATCTAAGT AGCATGCTGC TGGGCAAGAT GCAGTTGGAA ATGGAGGTGC TGGATTTAGT GGAGCAGATC CGCGAGGTGA TTGGGTTGTA TGAGCAGGTT GTCGAGAGCA AGGGGCAGCG GTTGCTGCTG CGCGCGCCGG AGATGCCGTG TTTGGTGTTG GGTGATGCAA CGCGCTTGCG GCAGATATTC GAAAATTTGT TGTCTAATGC GATCAAATTT ACTCCAACGG ATGGCTGCAT TGATGTGGAG ATTGATGCCG ATGGCGACAG TTTCCGGGTA TCGGTGACGG ATTCTGGTGA TGGGATCGCT GCCGAATTTC TACCGCATTT GTTTAGTCGG TTTCGTCAGG CTGATGGTAC GACGACCCGT TGTCACGGTG GGCTTGGTCT GGGGTTGGCG ATTGTGCAGA GTTTGGTGGA AATGCATGGG GGTTATGTTG GTGCGACCAG TCCGGGGCTT GGTAAGGGTG CAATGTTCAC GGTGTCTTTG TTGCGTTATG TATGTGCGAT CAATGTTGCC GATACTGTGA TCTGTGATCG GCGTTTTGGA TCAGTAGGCG ACCAAGGGGA GTATTGA
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Protein sequence | MDSTLSGADQ FRGPWWLLQV LSSTDFLLDI SPPLVLQSLD IPSDVYREML CTLEAGFCIV QIVLDDGQPV DGIFRLTNAS FGRHLRLDSV VGESVCGIMP DDGPEYIKRY GGVALSGQRV HFEARALRRW YSVEVMRVGA PEGRLLGVLF VDITEHKRME RRLAESEVRF NILADGLPMP VWVFDAQGGM RFVNTAYGEF FGVDLSSGTL PEWSMVLHPE DVLIFEFKLS AALKTQSALR ALVRARRYDG QWRWIEMSAT PRYSPDGHFI GLTGSSQDVT ERLEIELARE QLLKSERAAR NEAENMARLK DEFLSTLSHE LRTPLTTILG WSELLLQRIE EQHPCYKGLS VIASSAKVQK RLISDMLDLS SMLLGKMQLE MEVLDLVEQI REVIGLYEQV VESKGQRLLL RAPEMPCLVL GDATRLRQIF ENLLSNAIKF TPTDGCIDVE IDADGDSFRV SVTDSGDGIA AEFLPHLFSR FRQADGTTTR CHGGLGLGLA IVQSLVEMHG GYVGATSPGL GKGAMFTVSL LRYVCAINVA DTVICDRRFG SVGDQGEY
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