Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1916 |
Symbol | |
ID | 6203238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2134912 |
End bp | 2135784 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641703425 |
Product | peptidase M23 |
Protein accession | YP_001830590 |
Protein GI | 182682430 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.636111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCAC ATCTGCTCCC TGTGTCTGCT GCGGTCCTGA TCGCCATGAT GCCCCCTCCC TCCACTGCCC AAGACCGACC CGACTGGCGC ACCACACTGT GGCCACGGAC CGCCTCCCCC ACCACCTCAT GCATCACTGC CCCCAATTCC TGGCTGGATC TACGCCGCGA TGGGGATCGC TACACCGCCC AAGCAAGCAA TCCACTCGCA GGACCGGCAC AAGTCAGACT AATTGCAACC GGATCAATCC CATTACATAC AGCCCCCACA CTCCCCATCA CCGCCGTCCT GCCCCCAGGG CAGTGCATTG CACTAGCACA ACTGTACCCG GGTAAAAACG GTCTGCACCA AGGCGTGGAT ATCCGCCTGG AGGTTGTTCC AGGAGATCCG TACGGATACG CCGATGACAG CATCTACCGT GTGCCATTCG ACATCACCCC CATTCGCATT GATCAGGGCT TTGGCGGCAC ATTCAGCCAC CACGACGTTG CCAACTACTA CGCGCTAGAC TTTGCCCTCC CCAAGGGCAC TCCCATCTTG GCCGCACGTG CAGGACGCAT CATGGAAGTT CAAACAGGCT TTCAAGAAAC AGCCACCAAT GGTCACCACG TTGGGGGCGG CAACCTGATT CGCATCCTGC ACGAAGACGG CAGCATGGCC ATATACGCAC ACCTGTCTGC GGACGGCATC ACCGTGCATC AGGGTGACCG CGTCGCCACC GGACAATGCT TAGGATTGTC AGGCAATACC GGCTTCAGCA CCGCTCCCCA CTTACACTTT GCAATACAAC TAAATCGCAA TCTGCGCCTG GTATCCGTAC CGTTCCGCAT GGCAAGCCCT CTAGGAGAAC TACGCTTGCC GCGGAAACAA TGA
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Protein sequence | MPSHLLPVSA AVLIAMMPPP STAQDRPDWR TTLWPRTASP TTSCITAPNS WLDLRRDGDR YTAQASNPLA GPAQVRLIAT GSIPLHTAPT LPITAVLPPG QCIALAQLYP GKNGLHQGVD IRLEVVPGDP YGYADDSIYR VPFDITPIRI DQGFGGTFSH HDVANYYALD FALPKGTPIL AARAGRIMEV QTGFQETATN GHHVGGGNLI RILHEDGSMA IYAHLSADGI TVHQGDRVAT GQCLGLSGNT GFSTAPHLHF AIQLNRNLRL VSVPFRMASP LGELRLPRKQ
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