Gene XfasM23_1901 details

Gene Information

• Locus tag: XfasM23_1901
• ID: 6203209
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 2115613
• End bp: 2117640
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641703410
• Product: helicase c2
• Protein accession: YP_001830575
• Protein GI: 182682415
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATGC TTTCCCGGGC TAGCATCGAA GCACTCAGTG ATGGCGGCCT CCTGGCGCGC 
CAACTCGATA ATTTTGTTCC GCGTCCGGGG CAACAACGGC TGACTGCCGC GATTGGCGAG 
GTTTTTGAGC AACGCAACAT TCTGCTGGCT GAAGCCGGGA CCGGCACCGG CAAGACCTTT 
GCTTACCTGG TACCGACGTT GCTGTCAGGA CTGAAAACCA TCATTTCCAC AGGCACCCGC 
GCGTTACAGG AGCAGCTCTA CCACCGTGAT CTACCACGGG TACGCGCTGC CCTTGGCGTC 
GACCTGCGCA GCGCATTGCT GAAAGGCCGC ACCAACTATG TGTGTAAATA CCGTCTAGAG 
CAGACCTGTG CTGCGCCCCA TCTAGGCACC GCGGAGCAAA CGACGCAACT GCAGCGCATC 
CTCACCTGGA GCGGCCGCAC CCAATTCGGC GATATGGCCG AACTGGACAC GTTGCCAGAC 
GACTCACCGC TCCTACCGCT GGTCACCTCG ACACTGGATA ACTGCCTGGG AAAGGATTGC 
CCATTCTGGA ATGAATGCTT TGTCGTGCAA GCACGGCAGC GTGCCCAAGC GGCGGATGTT 
GTCGTCGTCA ACCATCATCT GCTGCTGGCT GATTTAGCAC TCAAACAAGA GGGCTTCGGC 
GAGATATTGC CAGGCGCACA GGCATTTATC ATTGACGAAG CACACCAGCT CCCGGCACTG 
GCCGCTAACT TTTTTGGCGA GAGTTTCGGC ATGCGTCCGT TACAAGAACT GGGACGCGAC 
TGCATGATCG AAGCACGCTC GGTCGCTGGT GCGCAGGCCG CACTGCAACA CTCCGTATGG 
CAATTGGAGC AGGCCTTACG CACGCTGCGC GCGGCAATGG AAGGCTTACC ATCACGCGGC 
ACGCAATCGC GCCTGCTCGC TAAACCAGAG GTATGTGAGG GATTTGAAAC TCTCATCACT 
GCGCTGACCT CGCTACACTC CCTGCTGGTT CCACTGCGCA GCGCCGCAGC AGGCTTGGAT 
GCCTGCGCCG CACGTGCCCA GGAGGCACTG TCCCGGCTAT TACGTTGGCT GGGGGAAACG 
GCCGAAACAA GCGGGTTAGA GGGGGATACC CCCTCTAACA ACGACGTCCT CTGGTACGAA 
CTGACACAAC GCGGCTTTCG CTGTCAGCGC ACGCCACTGG ATGTCTCTGC GCAATTACAA 
GCACACCGTG AAACATCAAT GGCCGCATGG GTGTTCACCT CAGCAACATT GGCGGTGGAT 
GGTAGATTCG AACATATCGC ACGACGCCTG GGCCTGAATC ATCCCATGAC ACTGCTGCAA 
CCCAGTACCT TCGATTGGGC GCGGCAAGCA TTATGCTACC TGCCTCCAGG CTTACCGAAT 
CCAGCGGCGC ACGGCTTCGG AGCCACCTTG ATTGAGGCAT TAATTCCGGT GCTGGAAGCC 
TCTTCAGGAC GCGCTTTTTT GCTGTTCGCC TCACATCGTG CATTACGCGA AGCCGCCACA 
GCGCTACGCG GCGGGCCTTG GCCATTGTTC GTGCAGGGAG ACGCGCCGCG CGCCACGCTC 
CTAGACCGCT TCCGAGTCTC TGGCAATGGC CTATTGCTCG GCTCAGCGAG CTTCCGCGAA 
GGTGTAGATG TGGCAGGGGA AGCGTTGAGC GTGGTCGTCA TTGACAAGTT ACCGTTTACA 
GCACCGGACG ATCCGGTATT CGAAGCGCGT TTGGAAGCCA TCCGCCAGGA AGGCGGCAAC 
CCGTTTTTTG ACGAACAATT GCCCCAAGCG GTCATCGCAC TGAAGCAAGG CGTTGGCCGA 
CTCATTCGCA GCGAGTCTGA TCGCGGCGTG CTGGTGCTGT GTGACCCGAG ACTGCTGTCC 
AAAAGCTACG GACGGATATT TCTAGATTCG CTGCCCTCAT TCCCGCAGAC ACGCGATATT 
GCTGAGGTAC GTGCGTTTTT CAACGGCAGC AATACTGCTC CCACGGAATC ACGGCACGAT 
TCCCCAATTT CACACCGCCA AGCGTCCGGT GTAGACCGGA TCGGATGA 

 

Protein sequence

MSMLSRASIE ALSDGGLLAR QLDNFVPRPG QQRLTAAIGE VFEQRNILLA EAGTGTGKTF 
AYLVPTLLSG LKTIISTGTR ALQEQLYHRD LPRVRAALGV DLRSALLKGR TNYVCKYRLE 
QTCAAPHLGT AEQTTQLQRI LTWSGRTQFG DMAELDTLPD DSPLLPLVTS TLDNCLGKDC 
PFWNECFVVQ ARQRAQAADV VVVNHHLLLA DLALKQEGFG EILPGAQAFI IDEAHQLPAL 
AANFFGESFG MRPLQELGRD CMIEARSVAG AQAALQHSVW QLEQALRTLR AAMEGLPSRG 
TQSRLLAKPE VCEGFETLIT ALTSLHSLLV PLRSAAAGLD ACAARAQEAL SRLLRWLGET 
AETSGLEGDT PSNNDVLWYE LTQRGFRCQR TPLDVSAQLQ AHRETSMAAW VFTSATLAVD 
GRFEHIARRL GLNHPMTLLQ PSTFDWARQA LCYLPPGLPN PAAHGFGATL IEALIPVLEA 
SSGRAFLLFA SHRALREAAT ALRGGPWPLF VQGDAPRATL LDRFRVSGNG LLLGSASFRE 
GVDVAGEALS VVVIDKLPFT APDDPVFEAR LEAIRQEGGN PFFDEQLPQA VIALKQGVGR 
LIRSESDRGV LVLCDPRLLS KSYGRIFLDS LPSFPQTRDI AEVRAFFNGS NTAPTESRHD 
SPISHRQASG VDRIG