| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1899 |
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| Symbol | |
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| ID | 6203208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2112562 |
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| End bp | 2114940 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641703408 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001830573 |
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| Protein GI | 182682413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGCC ATTCCCCCTG GTGGGGCTGG CTGATCGCTT GTGGCTTGGC AGGCTTGGCG
CTTGCCATGG GCTTTCTGAT CCCTTACACG CTTTACCTGA ATCAGCAGGT GACCGCTCGC
TTTGGTGAGC TGCGCTGGCA GATCCCAACC CGGGTCTATG CTCGCCCTTT GATGCTACAA
CCGGGGATGG CATTAGATGC GCGCACGTTG AAGATCGAAC TGGATGCTGC ATCCTATCGT
GAGGACAATC ACGGCGAGTT ACCAGGCACT TACCAACAAC AAAATGGCCG ATTCACTGTC
TCCAGCCGTG GCTACGTTGA TGTGGATGGT GCAATACCAG CAAGCCGTCT GATCATCACG
CTGAACAACA ACCAAGTGTC TGCACTGCGG AATGCAGATA CACGTAAACC AATCAGGCGC
GGGCGACTGG ATCCAGCACG GATCGCCACA CTGTACGGCC AGAAGCAGGA AGAACGCCGT
TTGGTCAGGT TGGAGGAAGT TCCCCAACTG CTCGTCACCG GCTTACAAGT GGTGGAAGAC
CGCGATTTCA AACATCACCA CGGCATCGAC ATCACCAGCA TTTTGCGCGC AGCCTGGGTG
ATGGTGCGTT CAGGCGGTGG CGTTCGCCAA GGTGCCAGTA CCCTAACGCA ACAGCTGGCG
CGTAGCGGAC TGCTTGGTAT CGGCAAAGAA CAGACGTTGC AGCGCAAATG CAACGAAATC
CTGTATGCAC TGATCCTGGA GGCACGCTAC TCCAAGCGCG TTATCCTGGA GTCCTATCTC
AATCAAGTCT ACCTGGGTCA ACGTGGCAGT CAGGCCGTAC ATGGTGTCGC AACTGGCGCG
GAGTTCTGGT ATGGACGTGA GCTAGGCTCG CTCACTACTG AGCAGGTCGC CCTGCTCATC
GGACTGGTCA AAGGACCTTC GTACTACGAT CCACGCCGTT TCCCTGATCG CGCATTGTCC
CGACGCAATT TCGTGCTTGG CAAACTGCAT GAAAACAAAC TGATCGACGA TGCTGAATAC
ATGCGCGCCC AAGCATCGCC CCTAGGTGTC CCCAAAGAAC CTGGCCTGGT TGCAGCCAAC
CGCTTCGTCG CGTACCTGGA CCTGGTACGC CGCCAGCTTG CTCACGATTA CCCAGAGAAT
GTGTTGCGTG GCGCAGGCAT GACCGTACTT ACCGGCATGT CGCCCTCAGC ACAAGCCTAT
GCTGAGAGAG GAGTAAAAAC CACGCTCAGT GCACTGGAAA AGGTCAAGGG GCTGAAACGT
CCGCCACTGC AAGCCGGACT GGTACTGACG GACGTGCATA ACGGCGATGT CCTGGCCGTG
GTCGGTAGTC GCGATGCAAC CCAATCGGGT TTCAATCGTG CCATTGAAGC GCAACGCCAG
GTGGGTTCGC TGCTGAAACC GTTCGTCTAT CTACTAGCAC TGGCCTCACC GGATCGTTGG
TCCTTGTCCA GTTGGGTAGA AGACACCCCG GTCAACATAC CGCTGGCACA TGGGCGCATT
TGGTCGCCAA GCAACTCAGA CAACATCAGC CACGGAACCG TGCGCTTGAT TGATGCATTG
GCACACTCTT ACAACCAAGC AACAGTGCGC GTTGGCATGC AGGTCGGCCC AGAACGTGTG
GCTCAATTGA TTAACGTTCT GGCCGGATTA AAAGCCGACG CCAACCCATC GCTGATCCTG
GGCGCAACCG ACCAAAGCCC TTATGCAATG ACGCAGCTCT ATCAGTTCCT GGCTTCTGGG
GGTGAAATCC AACCATTGCA CGCAGTGCGT GGCGTACTCG ATCCGCAAAA CAAACTGCTC
AAACGCTATG ACAATACCCC GGCACCTGCA CAGCCCGGTG ATTCAGTCGC AGCCAACGTC
ATCAGTGTTG CGCTACAGGA AGTGGTCAAC AGCGGTACCG CGCGGCAACT CATCATTGAT
GGCTTGGGTC GGCTGTCCCC TGCCGGCAAA ACCGGAACCT CCAACGATGG ACGTGACAGC
TGGTACGCGG GCTATACCGG GAACCACTTG GCTGTCATTT GGGTCGGCAA CGACCAAAAC
GAGCAAACTG GCCTATACGG CGCCACCGGT GCCATGCGCG TCTGGTCGAG CATCTTCTCG
CAGTTACCAA GCACCAGATT ACAAGTCAAC GGCAAAGGAC TGGATTGGCA ATCAGTCGAG
CCTATGGGCA CTGGCACCAC AGACGCAAAC TGCCCAGGCG CACGCCGCTT TCCGTTTGTA
ACCGGCTTCG CTCCGCCTTA TACAGCATGC TCTGGTGCTG GCGGAGCACC CGAAGCCGGG
CATAATATCG GCTGGCGTAA CTGGTTCGGG CTGGATAAGC AGAAGGGGGA CCAAGCATCG
CCCCCCATAA CGCCTCCTCC CGATCAATCG ACACAATGA
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| Protein sequence | MPGHSPWWGW LIACGLAGLA LAMGFLIPYT LYLNQQVTAR FGELRWQIPT RVYARPLMLQ
PGMALDARTL KIELDAASYR EDNHGELPGT YQQQNGRFTV SSRGYVDVDG AIPASRLIIT
LNNNQVSALR NADTRKPIRR GRLDPARIAT LYGQKQEERR LVRLEEVPQL LVTGLQVVED
RDFKHHHGID ITSILRAAWV MVRSGGGVRQ GASTLTQQLA RSGLLGIGKE QTLQRKCNEI
LYALILEARY SKRVILESYL NQVYLGQRGS QAVHGVATGA EFWYGRELGS LTTEQVALLI
GLVKGPSYYD PRRFPDRALS RRNFVLGKLH ENKLIDDAEY MRAQASPLGV PKEPGLVAAN
RFVAYLDLVR RQLAHDYPEN VLRGAGMTVL TGMSPSAQAY AERGVKTTLS ALEKVKGLKR
PPLQAGLVLT DVHNGDVLAV VGSRDATQSG FNRAIEAQRQ VGSLLKPFVY LLALASPDRW
SLSSWVEDTP VNIPLAHGRI WSPSNSDNIS HGTVRLIDAL AHSYNQATVR VGMQVGPERV
AQLINVLAGL KADANPSLIL GATDQSPYAM TQLYQFLASG GEIQPLHAVR GVLDPQNKLL
KRYDNTPAPA QPGDSVAANV ISVALQEVVN SGTARQLIID GLGRLSPAGK TGTSNDGRDS
WYAGYTGNHL AVIWVGNDQN EQTGLYGATG AMRVWSSIFS QLPSTRLQVN GKGLDWQSVE
PMGTGTTDAN CPGARRFPFV TGFAPPYTAC SGAGGAPEAG HNIGWRNWFG LDKQKGDQAS
PPITPPPDQS TQ
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