| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1864 |
|---|
| Symbol | fmt |
|---|
| ID | 6202180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2068554 |
|---|
| End bp | 2069477 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641703373 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_001830538 |
|---|
| Protein GI | 182682378 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTG TTTTTGCCGG TACACCGGAT TTTGCGGTGC CATCCTTGCG CTCGGTGACT
CAGCGAGCCG ATGTTGTTGC GGTCTACACG CAACCAGATC GCCCCGCTGG TCGTGGCCGT
GAACTGATGC CTTCGCCAGT CAAGCTGGAG GCGGTCGCGC GTGGTTTGCC GGTGTACCAA
CCCCAGACCT TGCGTTCGCC CGAGGTGTTG GAGCAGCTAC GTGCATTGCG TCCAGATCTG
ATTGTTGTCG TTGCTTACGG GGTGATTCTC CCCGAGGCGG TGTTGACGAT TCCTGATGAT
GGTTGCTGGA ACGTGCATGC TTCCCTGTTA CCGCGCTGGC GCGGCGCTGC ACCGATTCAG
CGTGCGATTG AGGCCGGTGA TACCGAAACC GGCGTTTGTC TGATGCAGAT GGAAGCGGGT
CTTGATACTG GCCCTGTGTT GATGTCCCTG AAGACTCCGA TTAATGCGCA TGAAACCAGT
GGGCAGTTAC ATGATCGTCT TGCTGAGATG GGAGCACAGC TACTTTCTGA TGGCCTGGGC
TTGTTGCGTG CTGGGCTACG GCCTGTGCCA CAGCCGCAGT TGGCTGTTGG TGTGACCTAT
GCGCACAAAC TCGGCAAGGT TGAATCCCGG CTTGATTGGG AGCAACCGGC CGAACGGCTT
GCCTGCAGGG TACGGGCGTT CCAGCCATGG CCGGTGGCTG AGGTCGTATT GAGTGGTGAG
CGGGTGCGTA TCCATGAGGC GTTGGCTCTG GATCTGGATC ACAGCCAGCC GCCGGGTACG
GTGTTGGCGG CGAGTAAAGA GGGGATTGAT GTGGCCTGTG TGCAGGGCGC GTTGCGTTTG
TGCAGATTAC AGAGGGAAGG TGGGAAAGCG ATCACCGTGG CTGATTACCT TAACGCCCGC
CGAGACTTGC AGGTCCGTGC GTGA
|
|---|
| Protein sequence | MRIVFAGTPD FAVPSLRSVT QRADVVAVYT QPDRPAGRGR ELMPSPVKLE AVARGLPVYQ
PQTLRSPEVL EQLRALRPDL IVVVAYGVIL PEAVLTIPDD GCWNVHASLL PRWRGAAPIQ
RAIEAGDTET GVCLMQMEAG LDTGPVLMSL KTPINAHETS GQLHDRLAEM GAQLLSDGLG
LLRAGLRPVP QPQLAVGVTY AHKLGKVESR LDWEQPAERL ACRVRAFQPW PVAEVVLSGE
RVRIHEALAL DLDHSQPPGT VLAASKEGID VACVQGALRL CRLQREGGKA ITVADYLNAR
RDLQVRA
|
|---|
| |