Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1857 |
Symbol | |
ID | 6203116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2060932 |
End bp | 2061813 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641703366 |
Product | competence lipoprotein |
Protein accession | YP_001830531 |
Protein GI | 182682371 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAAC GTCCTACCTT CTTCTCACCT ATCCACCTGT TGGCCGTGCT ACTGGCTACC TTCATCCTCA TCACCGGCTG TCACCGCGAA ACCAAAAAGA ACGCTGATGA TGGCATGCCG GTGGAACATC TGTACGACAA GGCACACACG CTCATGAAGA AAGGTAACTG GGCCGGTGCC GAGCTCAGCT TCAAGCGCCT CATTGCCCAA TACCCGTATG GCCCGTATAC CGAACAAGCA ATGGTCGAGA ACGCCTACGC ACAGTACAAG TCGGGAAAAC ACGACGACGC TGTATCATCA ATCGACCGCT TCATACGCAC TTACCCGACG CACCATAACA TCCCCTATAT GTACTACCTG CGTGGCCTGA GCAACAGCAA CCGCGACACC ATATTTTTAC GCAAAGTCTG GTCACTGGAC CTCAGTCGCC GTGACTTATC CGCCCCACAG CAAGCCTACA ACGACTTCAA AACGGTTCTG GATCGCTACC CAAACAGCCG TTACGCTACC GATGCCAAGA AGCAAATGAC TGAGCTGCGT AACATGTTCG CCCAATACGA GATGAACGTT ACACTCTACT ACCTGCGCCG CACGGCTTGG GTCGCAGCCG CAGGCCGCGC CAACTTTCTG CTAGAAACCT ACCCACAGAG CCCCTTCCAA TACGATGCAG TGGCCGCCCT TGGAGAGGCT TACACCCATT TGGGTAACAA GACACTTGCA GACAATGCAC GCCAGGTATT GCAAACCAAT GCCCCCGACC ATCCTTGGCT CAAAGGCAAA AAATGGCCCA AATACCCGGC AGCAATCCGC AAGCTGAACC CATTCGCAGG TGAAAAATCA GCAGCAACCG GACAGACTAA CGCCGTTGTA AATTCCAATT AA
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Protein sequence | MIQRPTFFSP IHLLAVLLAT FILITGCHRE TKKNADDGMP VEHLYDKAHT LMKKGNWAGA ELSFKRLIAQ YPYGPYTEQA MVENAYAQYK SGKHDDAVSS IDRFIRTYPT HHNIPYMYYL RGLSNSNRDT IFLRKVWSLD LSRRDLSAPQ QAYNDFKTVL DRYPNSRYAT DAKKQMTELR NMFAQYEMNV TLYYLRRTAW VAAAGRANFL LETYPQSPFQ YDAVAALGEA YTHLGNKTLA DNARQVLQTN APDHPWLKGK KWPKYPAAIR KLNPFAGEKS AATGQTNAVV NSN
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