Gene XfasM23_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1857 
Symbol 
ID6203116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2060932 
End bp2061813 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID641703366 
Productcompetence lipoprotein 
Protein accessionYP_001830531 
Protein GI182682371 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAAC GTCCTACCTT CTTCTCACCT ATCCACCTGT TGGCCGTGCT ACTGGCTACC 
TTCATCCTCA TCACCGGCTG TCACCGCGAA ACCAAAAAGA ACGCTGATGA TGGCATGCCG
GTGGAACATC TGTACGACAA GGCACACACG CTCATGAAGA AAGGTAACTG GGCCGGTGCC
GAGCTCAGCT TCAAGCGCCT CATTGCCCAA TACCCGTATG GCCCGTATAC CGAACAAGCA
ATGGTCGAGA ACGCCTACGC ACAGTACAAG TCGGGAAAAC ACGACGACGC TGTATCATCA
ATCGACCGCT TCATACGCAC TTACCCGACG CACCATAACA TCCCCTATAT GTACTACCTG
CGTGGCCTGA GCAACAGCAA CCGCGACACC ATATTTTTAC GCAAAGTCTG GTCACTGGAC
CTCAGTCGCC GTGACTTATC CGCCCCACAG CAAGCCTACA ACGACTTCAA AACGGTTCTG
GATCGCTACC CAAACAGCCG TTACGCTACC GATGCCAAGA AGCAAATGAC TGAGCTGCGT
AACATGTTCG CCCAATACGA GATGAACGTT ACACTCTACT ACCTGCGCCG CACGGCTTGG
GTCGCAGCCG CAGGCCGCGC CAACTTTCTG CTAGAAACCT ACCCACAGAG CCCCTTCCAA
TACGATGCAG TGGCCGCCCT TGGAGAGGCT TACACCCATT TGGGTAACAA GACACTTGCA
GACAATGCAC GCCAGGTATT GCAAACCAAT GCCCCCGACC ATCCTTGGCT CAAAGGCAAA
AAATGGCCCA AATACCCGGC AGCAATCCGC AAGCTGAACC CATTCGCAGG TGAAAAATCA
GCAGCAACCG GACAGACTAA CGCCGTTGTA AATTCCAATT AA
 
Protein sequence
MIQRPTFFSP IHLLAVLLAT FILITGCHRE TKKNADDGMP VEHLYDKAHT LMKKGNWAGA 
ELSFKRLIAQ YPYGPYTEQA MVENAYAQYK SGKHDDAVSS IDRFIRTYPT HHNIPYMYYL
RGLSNSNRDT IFLRKVWSLD LSRRDLSAPQ QAYNDFKTVL DRYPNSRYAT DAKKQMTELR
NMFAQYEMNV TLYYLRRTAW VAAAGRANFL LETYPQSPFQ YDAVAALGEA YTHLGNKTLA
DNARQVLQTN APDHPWLKGK KWPKYPAAIR KLNPFAGEKS AATGQTNAVV NSN