| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1846 |
|---|
| Symbol | |
|---|
| ID | 6202336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2047104 |
|---|
| End bp | 2048237 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641703356 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_001830521 |
|---|
| Protein GI | 182682361 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.759923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTT TTGCGGCGGT TCCGGTGTTG ATTGAGGAGA TTCGTGCTGG TCGCATGGTG
GTGATTGTTG ATGATGAGGA TCGTGAAAAT GAGGGCGATC TCATTATGGC TGCGGAGTTG
GTTGCACCGA AGGACATTAA TTTCATGGTG ACGCACGCGC GTGGCTTGGT CTGCTTGTCG
TTGACACGTG AGCGCTGTGC CCAGATTGGG CTGTCGCCGA TGGTGCAGCG CAACACGACG
CGGTTTCAGA CGAATTTCAC GGTCAGCATT GAGGCTGCTG AGGGTTTGAC GACCGGCATT
TCCGCGTATG ACCGTGCGCA TACCATCCGT ACCGCAGTGC GTCCAAACGC TAAGCCATCT
GACCTGCATC AACCCGGCCA CATCTTCCCC TTGATCGCGC AGCCGGGTGG GGTACTTACC
CGTGCTGGTC ACACTGAAGC GGCGAGTGAT TTGCCAATGT TGGCTGGCCT GGAACCGGCT
GGGGTGCTTG TGGAGATTAT GAATGCTGAC GGGACGATGG CGCGTCGCCC GCAGTTGGAG
GTATTTGCGC AGCAACATGG GTTGAAGATA GGTTCGATCG CTGATTTGAT CGCTTACCGT
CTTGCCAATG AACACACTGT TGAGCGTGTG GACGAGCGTG TCATTGAGAC CGAGTATGGT
TCGTTCTTAT TGGTGACTTA TCGTGATCGT ATCGCCCATG ACCTGCATTT TGCGTTGGTG
CGTGGCACTT TGGACGCTTC GATCCCAACT CTTGTCCGGG TACAGGTAGA GAATCCTCTG
GCGGATATGT TGCACTGGCG CCGTGAAGAC TTTGGTGTGG CTGCATCGGA TGCATTGCGC
ATGATCGCTG CGGCTGAGCG TGGTGTGATG GTGATGTTGG CAGCGCCACG AGATAGTGAT
GTCTTGTTGG CAAGGCTCCG GAGTGAGCCG GAGGTGGTTT CCAATGTGAA GGATGTAGGG
CAGTGGCGGC GTAACGGTGC TGGGGGACAG ATTCTGGCTG ATCTTGGCTT GGCGAAGCTG
CGCGTGTTGG GTACGCCGCG TCGCCAGATT GCCTTGGCCG GATTTGGTCT GGAAGTGCTA
GAGTATGTGG AATGCCGCGG CGGGGTCCCG GTCCCCTCCC AGGGTGTCGA TTGA
|
|---|
| Protein sequence | MNSFAAVPVL IEEIRAGRMV VIVDDEDREN EGDLIMAAEL VAPKDINFMV THARGLVCLS
LTRERCAQIG LSPMVQRNTT RFQTNFTVSI EAAEGLTTGI SAYDRAHTIR TAVRPNAKPS
DLHQPGHIFP LIAQPGGVLT RAGHTEAASD LPMLAGLEPA GVLVEIMNAD GTMARRPQLE
VFAQQHGLKI GSIADLIAYR LANEHTVERV DERVIETEYG SFLLVTYRDR IAHDLHFALV
RGTLDASIPT LVRVQVENPL ADMLHWRRED FGVAASDALR MIAAAERGVM VMLAAPRDSD
VLLARLRSEP EVVSNVKDVG QWRRNGAGGQ ILADLGLAKL RVLGTPRRQI ALAGFGLEVL
EYVECRGGVP VPSQGVD
|
|---|
| |