| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1834 |
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| Symbol | |
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| ID | 6202698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2038582 |
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| End bp | 2039169 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641703345 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_001830510 |
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| Protein GI | 182682350 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.723988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCAT CCCGGGGCTA TACATTGCCG GAGCTATTAA TCACGATGGC GCTAATCGCA
TTATTGACCG CCATCGGGTT ACCATTCTTC AAACAAACTC TGGAACGTCA AAGACTGGAA
AATAAAATGC ATTTGCTGAG TTCCCAGTTC GCAGGTGCCA GACTGGCAGC CATCACCCAA
CAAACGCCCG TCAGCGTCTG CCCGAGCCGC GGCGACAATA AATGTCGTCA AGATAGTAAT
TGGAGCAATG GCTGGATCAC CTATCGCGAT TCGAGTCGCA AGCCACAACC CATCTCATCA
AAAGCCATTT TGTACCAAGA GCAAATCACC AATAACGGTT CTCTAAGCAT TATCTCCACA
TCTGGACGGC CACGGGTTCG CTTCCTTCCA GATGGCCGCA ATGCCGGCAG CAATATCAGC
ATCCGCTTCT GCAACAATGA CCGCTTATTC GGCCTCATCG TGATCAACAA TTTAGGCCGA
ATTCGCTCGC AACGGATACT TAATACTCAA ACATGCTCAA CAGATCAGAA AATAAAAAAC
GGGCTAACAA TACCTAAAAC TTCCCAAAAA GAAACACCAT TCCAATAA
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| Protein sequence | MPSSRGYTLP ELLITMALIA LLTAIGLPFF KQTLERQRLE NKMHLLSSQF AGARLAAITQ
QTPVSVCPSR GDNKCRQDSN WSNGWITYRD SSRKPQPISS KAILYQEQIT NNGSLSIIST
SGRPRVRFLP DGRNAGSNIS IRFCNNDRLF GLIVINNLGR IRSQRILNTQ TCSTDQKIKN
GLTIPKTSQK ETPFQ
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