Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1788 |
Symbol | |
ID | 6203038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1985485 |
End bp | 1986147 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641703299 |
Product | fimbrial assembly family protein |
Protein accession | YP_001830465 |
Protein GI | 182682305 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGAA TTAACTTATT GCCCTGGCGC GTTGAGCGCC GCAAGCAGCG TGAGCGTGAG TTTTATGTGA TGCTTGGTTT TTCCACATTG GTGGGTATCC TCGTTTCGGC GCTTGTGTGG TTTTATTATG ACGCGCAGGT CAGTGGTCAG AATGATCGCA ACGCATTCTT GGTTTCCGAG ATAGAGGGGG TTAAGGCTCA GAATCGGGAA ATCGACCAAC TTGACAAGAA GAAAGAGCAT TTACTGGCGC GTAAGAAAGT GATCGAAGAG CTGCAATCAA ACCGTTCGCA AATGGTTCAT TTATTCGATT CGTTGGCACG TACCATCCCG GATGGCGTGG TTCTGACCAC TATTAAGCAG GAAGGTAATA GTTTGACTTT GCAAGGACGC TCTCAGTCAA ACGTGAGAGT CAGTACTTAC ATGCGCAATA TTGAGGGGTC AGGATGGATG ACTAATCCCG ATTTGTCGAT CATTGAAGCC AAGGAACAAG ATAAAAATAC GCTCATTGAT AGCAGGGCTC TGCCGTATGT ATTTACTATC AAAGCAAAAC TGTCCAAGCC AGAGTCGCCA GATAAGGCTC GTCATAGGCC CATATCTCCT AATTCTGGGA AAGCCTCTGC GTCGTCGTCT GCTGATTTTA AGCCGCTGTC AGAGGACAAT TGA
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Protein sequence | MARINLLPWR VERRKQRERE FYVMLGFSTL VGILVSALVW FYYDAQVSGQ NDRNAFLVSE IEGVKAQNRE IDQLDKKKEH LLARKKVIEE LQSNRSQMVH LFDSLARTIP DGVVLTTIKQ EGNSLTLQGR SQSNVRVSTY MRNIEGSGWM TNPDLSIIEA KEQDKNTLID SRALPYVFTI KAKLSKPESP DKARHRPISP NSGKASASSS ADFKPLSEDN
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