Gene XfasM23_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1788 
Symbol 
ID6203038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1985485 
End bp1986147 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID641703299 
Productfimbrial assembly family protein 
Protein accessionYP_001830465 
Protein GI182682305 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAA TTAACTTATT GCCCTGGCGC GTTGAGCGCC GCAAGCAGCG TGAGCGTGAG 
TTTTATGTGA TGCTTGGTTT TTCCACATTG GTGGGTATCC TCGTTTCGGC GCTTGTGTGG
TTTTATTATG ACGCGCAGGT CAGTGGTCAG AATGATCGCA ACGCATTCTT GGTTTCCGAG
ATAGAGGGGG TTAAGGCTCA GAATCGGGAA ATCGACCAAC TTGACAAGAA GAAAGAGCAT
TTACTGGCGC GTAAGAAAGT GATCGAAGAG CTGCAATCAA ACCGTTCGCA AATGGTTCAT
TTATTCGATT CGTTGGCACG TACCATCCCG GATGGCGTGG TTCTGACCAC TATTAAGCAG
GAAGGTAATA GTTTGACTTT GCAAGGACGC TCTCAGTCAA ACGTGAGAGT CAGTACTTAC
ATGCGCAATA TTGAGGGGTC AGGATGGATG ACTAATCCCG ATTTGTCGAT CATTGAAGCC
AAGGAACAAG ATAAAAATAC GCTCATTGAT AGCAGGGCTC TGCCGTATGT ATTTACTATC
AAAGCAAAAC TGTCCAAGCC AGAGTCGCCA GATAAGGCTC GTCATAGGCC CATATCTCCT
AATTCTGGGA AAGCCTCTGC GTCGTCGTCT GCTGATTTTA AGCCGCTGTC AGAGGACAAT
TGA
 
Protein sequence
MARINLLPWR VERRKQRERE FYVMLGFSTL VGILVSALVW FYYDAQVSGQ NDRNAFLVSE 
IEGVKAQNRE IDQLDKKKEH LLARKKVIEE LQSNRSQMVH LFDSLARTIP DGVVLTTIKQ
EGNSLTLQGR SQSNVRVSTY MRNIEGSGWM TNPDLSIIEA KEQDKNTLID SRALPYVFTI
KAKLSKPESP DKARHRPISP NSGKASASSS ADFKPLSEDN