Gene XfasM23_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1787 
Symbol 
ID6202935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand- 
Start bp1984817 
End bp1985485 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID641703298 
Productpilus assembly protein PilO 
Protein accessionYP_001830464 
Protein GI182682304 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.521607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA ATTCGTTTAA ATTGAGTGAC CTAGATTTTA ATAATATTGG TGCATGGCCA 
CAGAAGGTCA AGATGGTTTT CTGCGTCTTG GTCGGCTTTT TTATTGTCAT CATGGCTTGG 
TTCCTCGTCA TTAGCGGTGA GCGTGAGAAA CTTGGTGTGC TTGAAGGCAA AGAGCGCGAG 
CTGCGTTCGG AATTCCAAAA GCAGCAGGAA CGTGCTGTGA ACCTGCAGCC ATTAAAGCAG 
CAGTTGGCGC AGATGGAAGA GGTGCTGAAG CAGATGTTAC GGCAGTTGCC TAGTAAGACC 
GAAATGCCCG ATCTGATTGT TGATATCTCT CAGACTGCCT TATCTAGTGG TTTGGTGAAT 
GAGCTATTTC AACCAGGGGA TGAAGTTCTT CAGGAGTTTT ACGCCGAGAA GCCGATTTCT 
TTACGTATGG TTGGGAGCTA TCACCAGTTT GCTGCTTTTG TCAGTGGTGT GGCTTCTTTA 
CCGCGCGTAG TGATTTTGAC TATGCATGAT ATGAGTCTCA AACCGAAAAC CAATAGGAAC 
AATGTGTCTA CGCGAGGTTT GCTTGAATTG TCTGGCACAG TGAAGACCTA CCGCTACCTG 
GATGACCAGG AAATAGCTAA TAAGGAGAAT CGTACTGCTG ATGCTGCGAG CAAGAAGGAT 
GGACCATGA
 
Protein sequence
MSKNSFKLSD LDFNNIGAWP QKVKMVFCVL VGFFIVIMAW FLVISGEREK LGVLEGKERE 
LRSEFQKQQE RAVNLQPLKQ QLAQMEEVLK QMLRQLPSKT EMPDLIVDIS QTALSSGLVN 
ELFQPGDEVL QEFYAEKPIS LRMVGSYHQF AAFVSGVASL PRVVILTMHD MSLKPKTNRN 
NVSTRGLLEL SGTVKTYRYL DDQEIANKEN RTADAASKKD GP