| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1785 |
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| Symbol | |
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| ID | 6203035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1982380 |
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| End bp | 1984290 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641703296 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_001830462 |
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| Protein GI | 182682302 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0622717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATT TAAGGGATAG AATGATGACT TTATTTGAAG TCTTAGGCTT GCGTTTTGTT
AGGCGTATAG CCTCGCTTCG CGTATGTGAA ATTTGGGTAT GCATAGCTTT CGCTTGGTGT
TGCATCCCAG GAACCGTATC GGCTGAAAAC AAGCAAGCGA TTCCAGTGGC TAAAGCTACC
AATGCGCCAC TAAGCGTTTC CAAAATCGAT TTCAAACGTG GTGATGATGG CTCTGGCCGT
CTGATTTTGA AGTTTGATGG GCAGGGAGCC ACTCCTGACC TGCGTACGCA GGGTGGCACC
GTGCTGGTTG ACCTGGGGAC AGCTGTGTTG CCGACTGTCT TGCAACGCCA GATCAACGTT
GTTGACTTTG CTACCCCAGT GCAGCGTATC GACGCTAAGC CTATGGGTAA GGGTGCACAA
CTTGTGTTGA GCACGAAGGG AGCGTTTGAG TCGCTTGCTT ACCAGACAGG GGATGAATAC
GTGGTTGAAA TTGTGCCACG CAAGGGAGAG GCTGCCATGG GTGGGGCGAT CACCCCAGAA
TCGGTCAGTA AGTCCGCAGC GAAGATTTCC GCACAAGGGT ACAGTGGTCG TCCAGTAACG
TTTAACTTCC AAGACGTTCC AGTACGAACG GTTTTGCAGT TGATCGCTGA TGAGTCCAAT
CTCAATATTG TTGCTTCCGA CACTGTGCAA GGTAATGTCA CTCTACGTTT GATTAATGTG
CCATGGGATC AAGCGCTCGA CATCGTTTTG CGTGCTAAAG GATTGGATAA GCGCCGTGAT
GAGAAAGTAA TTTGGGTTGC GCCGCAACAG GAGCTTGCTA AATACGAGCA AGAAAAAGAG
GACGCGCGGA TCGCGATCGA AAATCGTGAG GGGTTAATTA CCGATTATGT CCAAATAAAT
TATCATTCGG CCACGGTCAT TTTTAAGGCA CTGACAGAAG CCAAAGGTAT GGGTGGGGGA
GGTAACGGTA CACCTAATAA TAATAGTGAT GATGCTTTCT TATCGCCACG TGGTCGGCTT
GTGGCTGATG AGCGCACTAA TACGTTGATG ATTAGCGATA TTCCGAAGAA AGTTGCGCAA
ATGCGTACTC TTATCCAGCA TATTGATCGT CCTGTGGACC AAGTGTTGAT TGAGGGCCGC
ATCGTGATCG CCACCGATAG CTTCGCGCGT GATTTGGGGG CCAAGTTCGG TGTTGGTGCT
GCTAGTCGTT TCAGCGATAA CACTGCAACG ATCGGTAGTA ATGTGACTGC TGGCAGCTCC
ACATCGGCTA CGCGGGGGCT TAATGTTGAT TTGGGCGGTC CGACCAACAC CACTGCTTCA
GTTCTTCCGA GTTTAGCCTA CACTTTGCTT GGACCTAAAT TTAATCTAGA TCTTGAGCTT
TCGGCATTGC AGCAGGAATC CCGTGGCGAG GTGATTTCAA ACCCTCGTAT TGTCACTGCA
AACCAGCGTG AGGGATATAT CAAACAAGGT AAGGAAATTG GGTATGTCAC GATCACTGGA
GGAGTCGCTG GTGGTCAAGC CACTCCGAAT GTCCAATTTA AAGAGGCTGT TTTGGAGTTG
CGTGTGACCC CAACGATCAC CAATGACAAC CGTGTGTTTC TCAACATGAC TGTCAAGAAG
GACGAGATTG ATCAAATGAT TACGATCGCC AATTTCGGTA CCGTGCCGAC CTTGAACAAG
CGTGAGATCA ACACTGCCGT ATTGGTTGAT GATGGTCAAA CTGTTGTTAT CGGTGGTGTA
TATGAGTTTT CCGACCGTAA TAGTGTGAGT AAGGTTCCGT TCTTAGGGGA TGTGCCTTTC
CTTGGTAATT TGTTTAAGAA ACGTGGTAAA GATAAACAAA AGGCCGAGCT TTTGATTTTC
GTGACTCCTA AGGTGTTGCG TGTGGCTAAT GCTACTGCTG CGGTGCATTG A
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| Protein sequence | MIDLRDRMMT LFEVLGLRFV RRIASLRVCE IWVCIAFAWC CIPGTVSAEN KQAIPVAKAT
NAPLSVSKID FKRGDDGSGR LILKFDGQGA TPDLRTQGGT VLVDLGTAVL PTVLQRQINV
VDFATPVQRI DAKPMGKGAQ LVLSTKGAFE SLAYQTGDEY VVEIVPRKGE AAMGGAITPE
SVSKSAAKIS AQGYSGRPVT FNFQDVPVRT VLQLIADESN LNIVASDTVQ GNVTLRLINV
PWDQALDIVL RAKGLDKRRD EKVIWVAPQQ ELAKYEQEKE DARIAIENRE GLITDYVQIN
YHSATVIFKA LTEAKGMGGG GNGTPNNNSD DAFLSPRGRL VADERTNTLM ISDIPKKVAQ
MRTLIQHIDR PVDQVLIEGR IVIATDSFAR DLGAKFGVGA ASRFSDNTAT IGSNVTAGSS
TSATRGLNVD LGGPTNTTAS VLPSLAYTLL GPKFNLDLEL SALQQESRGE VISNPRIVTA
NQREGYIKQG KEIGYVTITG GVAGGQATPN VQFKEAVLEL RVTPTITNDN RVFLNMTVKK
DEIDQMITIA NFGTVPTLNK REINTAVLVD DGQTVVIGGV YEFSDRNSVS KVPFLGDVPF
LGNLFKKRGK DKQKAELLIF VTPKVLRVAN ATAAVH
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