Gene XfasM23_1781 details

Gene Information

• Locus tag: XfasM23_1781
• Symbol: thiE
• ID: 6203033
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 1975298
• End bp: 1975912
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641703292
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_001830458
• Protein GI: 182682298
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.83041
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCAGC CTCGCGGCAT CTACCTAATT ACTCCTGATG AAACTGACAC TGCACGACTT 
ATCGCACACA CCGCACCATT ACTGAATGGC ATCGTTTGGC TGCAATACCG CAACAAACTA 
GCCAATACCG CATTACGCAC AGAACAAGCA CAGGCACTAC TAGCCCTATG CCGTCCAACC 
GGCATCCCCT TACTCATCAA CGACGACTTG GAATTAGCAC AAACCATTGG CGCAGATGGT 
GTCCACCTGG GCATGCATGA CAGCAACGCC AGCATTGCGC GAGCACAATT AGGACCGCAC 
GCCATCATAG GCGTCTCCTG CTACAACCAA ATTGAACGTG CGAAACAAGC AATCAAAGCC 
GGTGCCAGCT ACGTAGGCTT CGGTGCGTTC TATCCGAGTC ATACCAAAAC CACCCCATAC 
CGCGCCACAC CAGAACTGCT ACGCCAAACT ACCCATTTGG GTGTACCACG CGTGGCCATC 
GGCGGACTGA CGCCAAAGAA TATTGCTCCC ATCATCGAAG CCGGTGCAGA GCTACTCGCA 
GTGATCAGCG GAATCTACTC TGCAAAAAAC CCAATCACTG CACTGAAAGC ATATCAATCC 
CAATTCAACA TCTGA 

 

Protein sequence

MPQPRGIYLI TPDETDTARL IAHTAPLLNG IVWLQYRNKL ANTALRTEQA QALLALCRPT 
GIPLLINDDL ELAQTIGADG VHLGMHDSNA SIARAQLGPH AIIGVSCYNQ IERAKQAIKA 
GASYVGFGAF YPSHTKTTPY RATPELLRQT THLGVPRVAI GGLTPKNIAP IIEAGAELLA 
VISGIYSAKN PITALKAYQS QFNI