| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1766 |
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| Symbol | |
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| ID | 6204028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1954785 |
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| End bp | 1956449 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641703276 |
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| Product | response regulator receiver modulated diguanylate phosphodiesterase |
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| Protein accession | YP_001830444 |
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| Protein GI | 182682284 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.449709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCG ACGATACTCA GTACCGCATC TTGATCGTTG AAGACGACCG TTCACAGGCG
TTGTTCGCAC AAAGTGTGCT TCAAGGTGCT GGCATACATG CTCAGATAGA GATGTCTGCA
TCCGAGGTGC TAAAAGTGAT CGAAGATTAC CGCCCAGACT TGATTTTGAT GGATTTGAAC
ATGCCGGAGC TGGATGGGAT CAGTCTAACC ACATTGATAC GCCAGCAACC AAATCAACTG
CTATTACCAA TCGTGTTTCT GAGCGGCGAC ACCGATCCGG AAAAGCAGTT TGAGGTACTT
GATAGTGGTG CCGATGATTT CTTAACTAAG CCAATCCAAC CGCGCCACCT CATTGCCGCA
GTTTCTAATA GGATGCACAG GCTGCGCCAG CAGCAGCAAA ACGCACAACA GGCCGATACC
CAGATAAACA TCCAGAAGAC CTCCATCACC GAGCTTCAAA CTCGTATACA TATAGTGGAA
CAGCTAGAAG TGGCTCTTAG CAGTGGCGCG CAAGGTGCTT TGTTCTTTAT CGAAGTGAGC
AGCGCACTGA ACCTACGCAC GCGCTATGGT TACACTGCTT TCGAGCGACT GATGAACCAA
GTTGAATACC ATTTGGCGCA AGAAGCACAT CCATATTCAC TCGCACGCAT CAGCGATCAT
AGCTTTCTGC TTCTTGCTAT AGACTTGGCA GCAACTGAAC ATCAAGCTCT TGCCACACAC
CTACGTGAGC ATCTGGCCAC GCTACCACTG CCAATACAGG ACGATGAATT AGTACATCTA
CGCAGTGCAA TCGGCTATGC CCCGCTGAAT CAAGGCTTTA AAAACGCCGA CGATGCAGTG
GAGTGTACTG AGAGTGCCAC CCTAGAAGCA CGCCAAAACA ACGAAGGCAT ATACGCCTAC
GTACCATTGC GAACACCGGA GAATACCGGG CACTTAGCGT TACTTGATGG TCAGTTAGAA
TTGGCCTACC AACCCATTGT CGAAGTAGCT GGAAGCGATA CTGCGCAATA CCAAGTACTA
CTGCGTCTGC GCAAGGCAGA CGGCAACTTA CTGTCAGCTG GTCTGGTCAT CCCTGCTGCG
GAGGCAGCAG GTCGCATCAT GGAACTGGAT CAGCAAGTCA TAGAACAAGC ATTGGACATA
CTGAAACTAC ACCAGGACAC CAATCAGCAA CTGCGGCTTT TTGTATCGCA ATCGGTACGC
ACACTAATAC ATGAAGGTTT TTCTGATTGG ATCATCAAAA ATCTACGGGA GCGTAATGTC
AACGGTACGG GACTGGTGAT CGATTTGCGT TTGCAAGACG CAGTTATTCA CGCCATCCCC
CTCAAACAGC TCTGCAAAGA ACTACTGAAA CACAACGTAA AGTTCTGTCT AAGCCAATTC
GAATCGAACT CAGAAGCCAC TGTTTTGTTT AGCGAATTAC CACTCAATTT CGTACGTCTA
TCTCAGCATT TTGGGGACGC ACACAACCAC CCAGAACGGC AAAAAGAGCT CCCACTACTC
ATTGAACAAG CGCATGAACA CAACTTGCAT GTTATTGGAC AATGTATCGA AGACGCGCAA
GCCGCTACGT TTATGTGGAT GAACGGAGTC GACTTGATAC AAGGTAATCT GTTCCAGAAT
GTCAGCAAAG ATCTTAACTT CAACTTTCAC GACATGGTGC TCTGA
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| Protein sequence | MTTDDTQYRI LIVEDDRSQA LFAQSVLQGA GIHAQIEMSA SEVLKVIEDY RPDLILMDLN
MPELDGISLT TLIRQQPNQL LLPIVFLSGD TDPEKQFEVL DSGADDFLTK PIQPRHLIAA
VSNRMHRLRQ QQQNAQQADT QINIQKTSIT ELQTRIHIVE QLEVALSSGA QGALFFIEVS
SALNLRTRYG YTAFERLMNQ VEYHLAQEAH PYSLARISDH SFLLLAIDLA ATEHQALATH
LREHLATLPL PIQDDELVHL RSAIGYAPLN QGFKNADDAV ECTESATLEA RQNNEGIYAY
VPLRTPENTG HLALLDGQLE LAYQPIVEVA GSDTAQYQVL LRLRKADGNL LSAGLVIPAA
EAAGRIMELD QQVIEQALDI LKLHQDTNQQ LRLFVSQSVR TLIHEGFSDW IIKNLRERNV
NGTGLVIDLR LQDAVIHAIP LKQLCKELLK HNVKFCLSQF ESNSEATVLF SELPLNFVRL
SQHFGDAHNH PERQKELPLL IEQAHEHNLH VIGQCIEDAQ AATFMWMNGV DLIQGNLFQN
VSKDLNFNFH DMVL
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