| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1750 |
|---|
| Symbol | |
|---|
| ID | 6202991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1939109 |
|---|
| End bp | 1939645 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641703260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001830428 |
|---|
| Protein GI | 182682268 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.892099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGAC CAAGACTTGA ATTCGCTGTG GGTACCTTTC TGCTATTAAC CCTAGCCTCG
CTAATGGTGC TAGCAGTCGC ATCCACCAAC CAACGCTGGA GTATGGGCAG CAACCAATAC
ACTCTTACCG CTCACTTCAC CCAAATTGGA CAACTACGCA AGCAAGCCCC GGTACGAATC
AGCGGGGTTA ACATCGGCCA AGTCAGTAAC ATCACGCTGG ACCCGAAAAC ATTTGAATCG
GTGGTCACGC TGTCGCTAGA CAAGCAATAC AAGGATCTAC CTGCAGACAC CTCAGCCAAC
ATTCTCACGA GTGGACTCCT CGGCGAGAGT TACATCAATT TGCTGCCTGG CGGCGACCCG
GAAGTGCTCA AACCTGGGGA TCAGATCGCA TTTACTCAAC CAGCAGTGGA CTTAATCCAG
TTAGTCGGAA AATACATGTT CAGTGGCGGC AGCGATAAAT CCACATCCAG CAACACCACC
AGCACAACCG ATCACGCTGC CTCCTCTCAC ACAGACACTC AAGAAACTCA CCAATGA
|
|---|
| Protein sequence | MRGPRLEFAV GTFLLLTLAS LMVLAVASTN QRWSMGSNQY TLTAHFTQIG QLRKQAPVRI
SGVNIGQVSN ITLDPKTFES VVTLSLDKQY KDLPADTSAN ILTSGLLGES YINLLPGGDP
EVLKPGDQIA FTQPAVDLIQ LVGKYMFSGG SDKSTSSNTT STTDHAASSH TDTQETHQ
|
|---|
| |