| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1746 |
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| Symbol | |
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| ID | 6203736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1930078 |
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| End bp | 1933809 |
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| Gene Length | 3732 bp |
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| Protein Length | 1243 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641703256 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001830424 |
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| Protein GI | 182682264 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC CCCATGACCC CTATCTGACC TTGCCCCTCC ACGGCGTGCG TCTGATTGAA
GCCTCCGCGG GCACTGGTAA AACCTTCACC ATGGCCACCC TCGTCACCCG ACTTGTGGTC
GAACGAGGCT GGCGCATCGG CCACATTCTT GCAGTGACCT TCACCGAGGC CGCGACCCAA
GAACTACGCA CCCGGATCCG CGAGCGCCTA ATACTCGCCG CCCGTCTCGT CCCGCAGGCT
GCTGAACTGC CGGTGCCCCT TCCCTCAGCA CAACCACAGA TGTCGCATCC AACACCCCAT
CCCCAGGATG CACCTCGCAT CACTCCTGGA GTGACCAACT CCGCCTCCCC TGAACCCCCA
GATGTTGTGT TGACCCTACA GATCCTGCGT ACCCACCTTG CCGCTACGGA TGAGACCCCA
CACGCCCTGC ACTCCCGTCT ACAACAGGCC GCCGATGAAA TCGACCTCGC GGCGATTTTC
ACCATTCATG GCTTCTGCAC ACGCGTACTG CGCGAACATG CCTTGCATAC CGGACAAAGC
TTCATTCCGC CTACCTTACT GGCCAGTGAC CGCGATTTAC TACACGAACT GGCCGCCGAC
ATATGGCGTC AAGAAATTGC TGATCCCGAG GCCATCCAAG ACCTCATCCA CCTCTGGCCC
GCAGGCGCAC CGATGCTGGC TCAGGACCTG ACAGACCTGC TCTACCAACC GCACTTATCT
CCCGCGCCAT CGCTGGCAGC ACCAGTGGTG CTGCCTGATG CTGCCCTTGC CGTCGCTGAG
ACCACATTGC GCCACCTCTG GCAGACCGAG GGCGCGGCAC TGCGCAGCGC ACTGCACACC
GCCTTAGAAG AGGGCGTCCT CAACAAGAAA AGCTACAAAG CCGATGCACT GAACGATCTC
TGGGATTGGA TGGAACGCTG GAGCCTCGCA CCCAACGCCT ATCCAGAGCC ACACCCCAAA
CTGCAAACAT TGACCGTTGC GGCCTTGCAA GCCGGCACCA ATAAACAGGG TGCCGGACGC
AGCCCAAACT CCCCCGTGAG CGAAGCCGTA CAGCATTACC TGGACGCACT GACGAGCATC
GAAACAGCAC GCGCCCAGCA TCGCTTACGT CGCCTGCATC GCTTGCGTGC CGCAGCCCGC
CTCCGCCTCA CCGCACTCAA ACGCCAGCGT CGCGTACAGA CCTACGATGA TTTGATTCAA
CGTGTCGCCC AGGCACTGGA TGGGCCGCAT CGCCTCGCCC TAGTGCGGTC CCTGCGCCAA
CAGTACCGCA TGGCCCTCGT CGATGAATTC CAAGATACCG ACGTGGCCCA ATGGCGCATC
TTTCATCACG TCTTTGGTGA TACCGAGCAC GCACACACCG CCGACCTCAC ACCCGCATTG
TTTTTGATTG GCGACCCCAA ACAGGCCATC TATGGCTTTC GTGGCGGCGA CGTACACACC
TACCTGGCCG CCGCCGCCCG TGCCGAACGC GCGCCCCCGC TGGAGCGTAA CTTCCGCTCC
CGTCCCCTAT TACTGCGTGC CATTGAAGCA CTGTATACCC AAGCCGGCGA TGCAGCCTTC
CTCACCCCAG GCATTGCCTT CCACCCCGTA CAGCCAGGCA CCCACTGCCG CGATACAGAC
CTCAGCAACG CCGGAGTTCC CGCACCCGCG TTACAAGTGT GGCAAGCCCC ACCGCCATTG
GACAGCACCG CCAAGGGCAA ACCCAAACCC TGGAATGCCG ATGCCGCGCG CGCCCTGTGC
ACCGATGCCT GCGTCCATGC CATTCACCAA TGGCTTGCCG ACGCACAGAC CGGGCGCGCC
CTGCTGGATG GCCGCCCCGT GGGTGCCGGC GACATCGCCG TATTGGTGCG CAGCCACCGT
GAAGCCACAT TGATGCAGCA GGCCCTAGCG CGTGCGGGCA TTCCTGCCGT TGCTGCTGGC
AAACGCAGCC TATTGACCAC CGACGAAGCC AATGAAGCCC TGGCACTATT GCTGGCACTG
CTTCACAGCG CTGACGAAGG CCGTTTGCGT ACCGCACTGT CCACCGTCCT CGTGGGCCTT
ACCGCCGAGA CAATCGCCAC ATTTGACCAT GACAGCGTTG CCTCCCGTCA CTGGCAGCGC
CAGGCGTTGC ACTGGCGCGA ACGCTTACAC AGTGGCGGCC CCTTGGGGTT ACTGACCGAC
CTATGCGCGC TACATGCCGC ACGCTTGCTC AGCCTCTTCG ACGGTGAGCG CCGTTTGAGC
AACTACCTAC AACTGGGCGA ACTACTCCAG CAAGTCCACT TGCGCGCCCT GGGCTTACAT
GGCTTGGTTG ATTGGTTGGC ACGGCGGATT GCTGAAGCCA AGAATGATGA CGAAACACAG
CTATTGCGTT TGGAATCAGA TGCGCGCCGC GTGCAGATCG TCACCCTGCA TAAAAGCAAA
GGCCTGGAAT ACCCACTGGT CTTCCTGCCT TACGTTGCGA TTGGCCGTTC CCATGCCGGC
CCAGGCCGTT ATTGCGTCGT ACACGATGCG CAGCAAGGGC GCTGCCTGCA TTGGTGCCTT
GATAAACAAG CACCAGAGTG GCAACGCGCT GAAACAGCGT GGAAACAGGA ACAGCGCGCT
GAAGAAGCAC GCCTACTTTA CGTTGGCCTG ACCCGTGCCA AACATGCACT GTGGATCGCT
ACCGGCACCT TCTATCAGAC GGAACGTACC GCCTTATGGC CACTGCTGGG TGATCCCCAG
GCAGTGCCGG CGCAGCCGGG CATCGTCTTT GACACCGCTG TACCACCGGC AATTTTGCCC
CGTTTGACCC CAGAACAGCC GCACAGCGTC CCCCCCGCAC GGACCGCACA GCGTGGTGCC
CTGCTTTCGG ATTGGTGGGT GTACAGCTTT ACCCAATTGG CGCATGCCAA AGCGGAGCCT
GCTCCTGATG GGGGTCGCCG TATTGCCGAG CCACTCACTG GAGGGCAGGA CGAACCAGCC
TGGCCACAGG ATGCCATCCA ACAGCCTCTG CCTGGGAGCG AAGTACCCGC CGACCCCCGT
TTTACCGGCA TCCGTTTTGG TGTGGCACTG CATGAAGTGT TCGAGCGTAC CGATTTCCTA
GCCTGGAGCA CTTGGCGTGC CAATGTCCCT GTGCCTGCGA CGGAACGTGG CGTGTTGCTC
CAAGCCCTGC GTGGCAGCGG CTACGTGGCT GAAGACGTGG AGGCCGGTAT CGCCTTGCTA
ACCCCATTGG TGGGCCATAC CTTGACCAGT GTCCTTCCCG AGGGCGTGCG TTTGTGTGAT
GTGCCGACAA CCGAGCGGCG ACCGGAGATT GAATTCCAAT TTGTCATCCA GGCCACGGCG
GTGGATGCCT TGCTTGCCTT GCTCCATGAC CACGGCTTGC TACAGCAGCG TCAGAGCTTC
GGCATGCGGC GTCGCTTGGA AGGACTGATG ACCGGCATGA TCGACCTCAT TTATCGCCAC
GCCGGACGGT GGTACGTCCT GGATTACAAA AGCAATCGCC TGCCGGATTA CACACCAGCG
CATCTTTCTG TGGCGATGAC TGACAGTGAA TACGACCTAC AGGCGCTGAT CTACACCGTG
GCCCTGCATC GCTGGTTGCG CTTCCGTTTG CGTGATGCGT ACGACTACGC ACGTGATATG
GGAGGCATCC GTTACCTGTT CTGCCGCGGT ATGGACGCGA CGCGTCCCAA TGCAGCGGGC
GTGTATACGC AATCCTTTGC TCCTGCCTTG ATTGAGGCAG TTGATGCGAT GTTCAGTGGA
GTCTGTCCAT GA
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| Protein sequence | MNTPHDPYLT LPLHGVRLIE ASAGTGKTFT MATLVTRLVV ERGWRIGHIL AVTFTEAATQ
ELRTRIRERL ILAARLVPQA AELPVPLPSA QPQMSHPTPH PQDAPRITPG VTNSASPEPP
DVVLTLQILR THLAATDETP HALHSRLQQA ADEIDLAAIF TIHGFCTRVL REHALHTGQS
FIPPTLLASD RDLLHELAAD IWRQEIADPE AIQDLIHLWP AGAPMLAQDL TDLLYQPHLS
PAPSLAAPVV LPDAALAVAE TTLRHLWQTE GAALRSALHT ALEEGVLNKK SYKADALNDL
WDWMERWSLA PNAYPEPHPK LQTLTVAALQ AGTNKQGAGR SPNSPVSEAV QHYLDALTSI
ETARAQHRLR RLHRLRAAAR LRLTALKRQR RVQTYDDLIQ RVAQALDGPH RLALVRSLRQ
QYRMALVDEF QDTDVAQWRI FHHVFGDTEH AHTADLTPAL FLIGDPKQAI YGFRGGDVHT
YLAAAARAER APPLERNFRS RPLLLRAIEA LYTQAGDAAF LTPGIAFHPV QPGTHCRDTD
LSNAGVPAPA LQVWQAPPPL DSTAKGKPKP WNADAARALC TDACVHAIHQ WLADAQTGRA
LLDGRPVGAG DIAVLVRSHR EATLMQQALA RAGIPAVAAG KRSLLTTDEA NEALALLLAL
LHSADEGRLR TALSTVLVGL TAETIATFDH DSVASRHWQR QALHWRERLH SGGPLGLLTD
LCALHAARLL SLFDGERRLS NYLQLGELLQ QVHLRALGLH GLVDWLARRI AEAKNDDETQ
LLRLESDARR VQIVTLHKSK GLEYPLVFLP YVAIGRSHAG PGRYCVVHDA QQGRCLHWCL
DKQAPEWQRA ETAWKQEQRA EEARLLYVGL TRAKHALWIA TGTFYQTERT ALWPLLGDPQ
AVPAQPGIVF DTAVPPAILP RLTPEQPHSV PPARTAQRGA LLSDWWVYSF TQLAHAKAEP
APDGGRRIAE PLTGGQDEPA WPQDAIQQPL PGSEVPADPR FTGIRFGVAL HEVFERTDFL
AWSTWRANVP VPATERGVLL QALRGSGYVA EDVEAGIALL TPLVGHTLTS VLPEGVRLCD
VPTTERRPEI EFQFVIQATA VDALLALLHD HGLLQQRQSF GMRRRLEGLM TGMIDLIYRH
AGRWYVLDYK SNRLPDYTPA HLSVAMTDSE YDLQALIYTV ALHRWLRFRL RDAYDYARDM
GGIRYLFCRG MDATRPNAAG VYTQSFAPAL IEAVDAMFSG VCP
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