Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1704 |
Symbol | |
ID | 6202859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1882010 |
End bp | 1882504 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641703214 |
Product | PilX protein |
Protein accession | YP_001830382 |
Protein GI | 182682222 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4726] Tfp pilus assembly protein PilX |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.648348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGT TACGGGCATT TGTCGATTCG CTGCTTCGAG GTCGCGCACG TTCCCAGCAG GGAGCTGTTT TATATGTTGT GCTGGTGGTG TTGGTGCTAT TGGCGTTGAT CGGCATCGTT GGTATGCAAG TTGCAACCAT GCAGGAGCGC ATGTCTGCGA ATTATCTTGC GGCCAATATG GCTTTTCAGA GGGCTGAGTC GTTGGTGCGT GATCGGGAGT CCACGATTAA TAATGGAGCC GAGTACGAGT ACCAGAACTG CTTGGTTCCC TATGATCCTG TTGCTTGGGT GAACAGCATC GGTAAAGGCG TGGTTGCTGA TGTGCTGACG CGTAACATCA GTATTTGCAT GCAACAGTGC AGTGCGAGCG CCGGTTCTGA TCGGTCCGAG AGTGGCTGCA ATATGTTCCG TATCACTGTA TTCAGTCGGG ATCGTAATTC CGTTGATGCT TCAAGTTCCT TGTCATCCAT TGACACTATT TTTGTCAGGC CTTGA
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Protein sequence | MMKLRAFVDS LLRGRARSQQ GAVLYVVLVV LVLLALIGIV GMQVATMQER MSANYLAANM AFQRAESLVR DRESTINNGA EYEYQNCLVP YDPVAWVNSI GKGVVADVLT RNISICMQQC SASAGSDRSE SGCNMFRITV FSRDRNSVDA SSSLSSIDTI FVRP
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