| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1703 |
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| Symbol | |
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| ID | 6202858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1877441 |
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| End bp | 1882006 |
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| Gene Length | 4566 bp |
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| Protein Length | 1521 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641703213 |
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| Product | fimbrial assembly protein |
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| Protein accession | YP_001830381 |
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| Protein GI | 182682221 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0874412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACGTTCTGAA GTGCGTCTTG CTTTGCGTCA TGTTCATCGG TCTTTGTTTT
CTCGTGCGGC GCGGTATCAC GGGGCCTGGC CCATTGGATA TTGCACAGGC GCCGTTGTTC
ACGAGCAACG TGGTGCCGCC GCTCAATATG CTGGTGATGG GGCGTGATCA CAAGTTGTAC
TACGAGGCCT ACAACGATGC GTCCGATTTG GACGGTGACG GTGTGCTGGA TGTCGGTTAC
AAGCCAGATA AGATCACGTA TTACGGTTAT TACAATTCGA ATGTGTGTTA TCGCGCGAAC
GGGACTATGT TTCAGGCGAT GTCCGTTGCC AATGGGAGTA ACGGAAAAAA ATGCACGGGT
GCTTGGAGCG GTGATTTTCT GAATTATTTA ACCACATCGC GTATGGATGC TTTGCGCAAG
GTATTGTTTG GTGGTTATCG CGAAGTCGAC ACGCTGACGC AGACTATTTT GCGTGCTTCA
TATACTCCAC AGGACGCGCA TAGTTGGGGC AAGGAGTACG CTAGTGTGTC GCATGACGGG
TATGACATCT CTGATTATGC GCCGCTGAGT GCGCCTGGGA GCGGCCATTA CCATTTGTTT
GCTGTGACGA CGCTCAGTGA TAATGGCATT CCACAATTAC GTGTACTTGC CGATACAACC
TTCCGTGTTT GGAATTGGGT GTCTATTGAG CGGCCGGTTG CTGGTAGTGA TTGCTTTACT
CCTGAGAATA AGCGCGTCAG CTGTGTGAGT GGGGGTTCTA GGGGTATTAG TGATTACCCG
TTACGGGTCG AGGTATGTTC TGTTGCCGAT GAGTTACGTG AAAGTAACTG TAAGCTTTAT
CAGAACAATA CTTCCTATAA ACCGACTGGA ATCCTGCACG ATTATGGGGA GAATGACCGT
ATGTACTTCG GTCTGTTGAC TGGCTCATAC CAGAAAAATA TTACTGGTGG TGTCCTGCAT
AGCAATGTAT CCAATTTTTC TCGAGAGATT AATCCGTTGA CTGGGCAATT TTGCTTGAAT
GGCAATTGCG GCGGTGGGGG AGACGTGAAA GGGATTGTGC ATACGATTAG TAGTTTCCGT
ATGCTGGATT TCAACTATAA GGACTATACG TATGGGTGTG GGTGGATCGC GACGCGCCCG
GTGAAAGAGG GTGAGTGCTG GATGTGGGGC AACCCCGTCG CTGAGATGAT GTACGAGACG
CTACGTTACT TTGGGGGAGC GACTGCGCCG CGACCTGAGT ACGATATTAA TAGCAGCTCC
CAGGACATTG CTACGTTGCA ACTGTCCCAT CCCGGTTGGA AGCCGCCGTA TACCTCTGTC
GATAAGGGAG GCAGTGGCTA TTCGGTGTGC GCGCAGCCGA CAATGACAGT ATTTAGTGAT
ATCAACCCTT CTTACGATGA CAAGTTGCCG GGGTCTCACT GGTCCAATTT CAGTGGATCA
GGTGATCCTG CTTCGATGCG CAATTTGGAT GTTTCCGCGG AGGCTGATCG GATCTGGGAG
GCTGAAGGCG GCGGCAGCAA GTTATTTTTT ATCGGGGAAT CCAACAATAA TTCCGATAAT
GCACCGACAC CGAAAGTGGT GAGTAACTTA TCCACGGTGC GTGGGTTGTC TCCCGAAGAA
CCCAGCAAGG GCGGAACTTA TTATTCTGCT GCTGTTGCAC GCTATGGGGC TAATCACAAG
ATGGGCGGCA GTAAATTCGT ACGCACCTAT GCGGTTGCAC TGGCTTCGCC GCTTCCAAAA
TTTGAGTTCC CAGTTGGTAA TGCTCGAGTG AGTCTGGTGC CGTTTGCTAA ATCTGTGCGT
GGTTTCGGTA TCTCTGCGAC TGGCAATTTC CAGCCTACTA ACCAGATCAT TGATTTCTAT
GTGCAGCGTG TGGCCAATAT GGCTGGATCT TCTGGGGCAG ATTACGATGC AACCATCAAT
GGTGGCCGCC CCTATGCAGA GTTCCGTATC AATTACGAGG ATGTGGAACA GGGGGCTGAC
CATGACATGG ATGCAATCGC GCTTTACACC ATTTATGTCA ATGCCAAGAA TCAACTGGTG
GTAACACTCA AATCCGAATA TTCTGCTGGA AGCATTGATC AGCATATGGG ATATGTGATC
TCTGGTACCA CACGCGACGG TGTGTATTTG GAAATATGTG ATCTTGCTGA TGGTCACAGT
AATGATGGGA CGCGCAGTAG TTGTGCAGGA CAACAGCCCT ACAAACTGAA TACTCCCCCT
AATCGCTTGC CTGGATATTG CAATGCGACC CCGATGCCTG GGGATTGTAA TGGCTTGCCC
CCTGTTGCAA CGCGAATATT CTCTGTGGCT TCTCAAGGTG CAAATGCGGT CTTGTTAAAA
GATCCACTCT GGTATGCGGC CAAGTACGGT CATGATCAGG GAGTGATACT CAATAGTAGT
GGTGGTCTGG CCAACTATTT CCCAGTGAAC AATGCGCTTT ATTTGCGTCA GCAGGTGGCC
AAAGCTTTTT CAGCCATCCA GAGTCAGGCG GGGAGCAGTG GTTCGATTGC CGTCGTTGGA
GCCAGTGTTT CCAGTACCTC GTTCGCGGTG ATCCCCAGTT ATTCCAGCAC CCATGATGGT
AAGGATTGGA CGGGTGAGAT GACCGCTTAT CGTATTGATG CTAATGGGAT GATAGGTGAT
GTGCTGTGGT TGGCGAGTGC TGGTGTGCCG AGTGGTACCA GTGCGATAGC CAAGCGTGTG
ATTTATACGG CGCTGAGTCA TGTTGACGAT ACCAACCGCG CATCTGTAGT ACGTCGTTTT
GTCGCTGAAA AATTGGTGGA CAGTAGTAGC GGTGATGTCG CCACTGATGC TGCGCAGGTC
TTTGGTCGCC TTGGATATAC ACCACGTGGT GTTATTGATG ACTTTGGTAG TTCTGTCACG
CCCAATCAAT TAGTGAATTA CTTGCGTGGT GACAAGAGGA TGGAGGGTGC AACACTCAAC
ACGGCACCAT TCCGCCGTCG TTTCGGTCCG TTGGGCGACA TGATTAATTC AATTCCTGTT
GTCGCAACGC GTCGTGCGAA TTATGGGTGG GCCACTGCGA GTGGGTTGCC TCAGGTGCAG
CGTGATAGTT ACTCGGCTTT CATCAATGCT CGCCAGAATT CAACGGCTGC TGAGCATATT
TTTGTTGGTG CTAACGATGG CATGTTGCAT GCCTTTGACG ATAAGGGTAC GGAGCGTTTT
GCCTATGTGC CCAACGGTGT GCTGCATCAT TTGGGTTTTC TGGCCAACCC GGAGTATCAG
CATCATTACT ATGTTGATGG CAAATCGACA TTGAGTGATG CCTATCTGGA TGGAAGTTGG
AGGAGTGTGT TGGTTGGTGG CACTGGGGCG GGTGGCCGTT CGATGTTTGC TCTGGATGTT
ACTAGCCCAA GCACGTTCAA TGAGTCAAAT GTGTTGTGGG AAATGAACAG TGAGAATGAC
GACGATATGG GGTACACCAT GGGGAAGCCC TACATCGTCC CGTTACAGAA TGGCAGTTGG
GCGGCGATTT TCGGTAACGG TTACAACAGC ACTAATGGTC GGGCTGTGCT CTTTATAGTC
AATCTGGCAA CGGGTCAGCT GATTCGCAAG ATTGAGGCGC GTGATGGGAT TGATCCCGAT
GGCTCTGATC CTGCAAACAT GGGATATAAC GGTCTCGGTA ATTTGGCGGT GTTGGATACG
GATGGCGATG GGTTGGTCGA TATGGTGTAC GGGGCTGATC TGCACGGCAA TCTCTGGAAG
TTCAACCTGA GTGGTAAAGA TCCGCAACGC TGGGGTATCG CTTATAAAGA TGGTTTGGGT
AATCCAATAC CGCTGTTTGT GGCCCGTAAT CCTCAAGGCT ATCGCCAACC GATTACGGGA
GGTTTGGAAG TGGCGGTGGG GCCGAGTGCT GGCTATATCA TTTATTTTGG TAGTGGCCGT
TATTTTGCTG CCAATGACAA CAACAGCAAA GACCTCAGTA CGTTGTATGG CATCTGGGAT
AGCGGGAGTC CTGTCATTGC AGGCCGTGCA GCTTTATCAG CTCAAATTAT CCAGGCTAGC
GATCATCCGA CGTCGCCAGA CACCCGCATT GTCACCCGTA GACCGCTGAG TTATCTCAGC
AAGCATGGTT GGTATGTCGA TTTGGTGGTA CAGGGACAGG ATCCACAGGG GGAGCGTTCC
ATTGCCACAC CATTGTTACA GGGGGGGCGT GTCTTCTTTT CGACCTATGT GCCGGGAGTG
AGTGTGAATT GTGCTTCGGG CGGGAGCAAT TGGCTTTATG TGTTAGATGC TGCTTCAGGT
GGTGCCGCGC TCGGTCAAGT CAATATACCG TCCCGTGGCT CCAGATCCAG TATCGGTAAT
AGTGATACTG GTGCGGTTTC GACGGGTGGA GATGCTCCAA TTCAGAGTGT TGCAATGACC
CGCACAGCGC CTAGACAACC GGTTTTTTGT AATCCAGGTG AACAGGGATG TCCCTTGGTG
CCAGAGACAC ATGCTGCACC TTTGGATACC CGATGCAGCG AAGTCATCAT TGATCCAAAT
GATCCAACCA GGTCCATCTC ACTGTTCAGG GCATGTGGAC GGCAATCGTG GAGGCAGTTG
CGATGA
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| Protein sequence | MKKNVLKCVL LCVMFIGLCF LVRRGITGPG PLDIAQAPLF TSNVVPPLNM LVMGRDHKLY
YEAYNDASDL DGDGVLDVGY KPDKITYYGY YNSNVCYRAN GTMFQAMSVA NGSNGKKCTG
AWSGDFLNYL TTSRMDALRK VLFGGYREVD TLTQTILRAS YTPQDAHSWG KEYASVSHDG
YDISDYAPLS APGSGHYHLF AVTTLSDNGI PQLRVLADTT FRVWNWVSIE RPVAGSDCFT
PENKRVSCVS GGSRGISDYP LRVEVCSVAD ELRESNCKLY QNNTSYKPTG ILHDYGENDR
MYFGLLTGSY QKNITGGVLH SNVSNFSREI NPLTGQFCLN GNCGGGGDVK GIVHTISSFR
MLDFNYKDYT YGCGWIATRP VKEGECWMWG NPVAEMMYET LRYFGGATAP RPEYDINSSS
QDIATLQLSH PGWKPPYTSV DKGGSGYSVC AQPTMTVFSD INPSYDDKLP GSHWSNFSGS
GDPASMRNLD VSAEADRIWE AEGGGSKLFF IGESNNNSDN APTPKVVSNL STVRGLSPEE
PSKGGTYYSA AVARYGANHK MGGSKFVRTY AVALASPLPK FEFPVGNARV SLVPFAKSVR
GFGISATGNF QPTNQIIDFY VQRVANMAGS SGADYDATIN GGRPYAEFRI NYEDVEQGAD
HDMDAIALYT IYVNAKNQLV VTLKSEYSAG SIDQHMGYVI SGTTRDGVYL EICDLADGHS
NDGTRSSCAG QQPYKLNTPP NRLPGYCNAT PMPGDCNGLP PVATRIFSVA SQGANAVLLK
DPLWYAAKYG HDQGVILNSS GGLANYFPVN NALYLRQQVA KAFSAIQSQA GSSGSIAVVG
ASVSSTSFAV IPSYSSTHDG KDWTGEMTAY RIDANGMIGD VLWLASAGVP SGTSAIAKRV
IYTALSHVDD TNRASVVRRF VAEKLVDSSS GDVATDAAQV FGRLGYTPRG VIDDFGSSVT
PNQLVNYLRG DKRMEGATLN TAPFRRRFGP LGDMINSIPV VATRRANYGW ATASGLPQVQ
RDSYSAFINA RQNSTAAEHI FVGANDGMLH AFDDKGTERF AYVPNGVLHH LGFLANPEYQ
HHYYVDGKST LSDAYLDGSW RSVLVGGTGA GGRSMFALDV TSPSTFNESN VLWEMNSEND
DDMGYTMGKP YIVPLQNGSW AAIFGNGYNS TNGRAVLFIV NLATGQLIRK IEARDGIDPD
GSDPANMGYN GLGNLAVLDT DGDGLVDMVY GADLHGNLWK FNLSGKDPQR WGIAYKDGLG
NPIPLFVARN PQGYRQPITG GLEVAVGPSA GYIIYFGSGR YFAANDNNSK DLSTLYGIWD
SGSPVIAGRA ALSAQIIQAS DHPTSPDTRI VTRRPLSYLS KHGWYVDLVV QGQDPQGERS
IATPLLQGGR VFFSTYVPGV SVNCASGGSN WLYVLDAASG GAALGQVNIP SRGSRSSIGN
SDTGAVSTGG DAPIQSVAMT RTAPRQPVFC NPGEQGCPLV PETHAAPLDT RCSEVIIDPN
DPTRSISLFR ACGRQSWRQL R
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