| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1700 |
|---|
| Symbol | |
|---|
| ID | 6204024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1874331 |
|---|
| End bp | 1875785 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641703209 |
|---|
| Product | modification methylase NspV |
|---|
| Protein accession | YP_001830378 |
|---|
| Protein GI | 182682218 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAG CAAAGAAACG CAAAATTGAG TTCGGAGACT TCCAGACTCC GTCTGCACTA
GCGCGCCTCG TTTGCGAAAG ACTGTCCTTG CTAGGCTTTG CGCCGGATGT AGTCATTGAG
CCAACCTGCG GTGTTGGGGC GTTCGTGCTT ACTGCCGCGC AACAGTTTCC GCGTGCCGAA
GTGCATGGCT ACGAAATCAA CCCCGCCTAC CTTGATGAGC TACGTCAAAG CGTCGAAGGG
CTCGGCGTCA CTCGACGCGT GAACCTACAC CAGCAGGATT TCTTCGAGAC CGATTGGCTG
GCCGAGCTGG AAGCGATGCC GGGCAACGTG CTTGTGCTCG GCAATCCGCC GTGGGTGACC
AATGCCGGAC AGGGAGCCAT AGGCGGCACG AATCTTCCTC AGAAATCGAA TTTCCTAAAG
CACAAAGGCT TCGACGCCAT CACCGGTAAA GCCAACTTCG ATATCTCGGA GTGGATGCTC
ATCGACTTGA TGCGGACGCT TGGCGCGCGC GGTGGCGATC TAGCGATGCT TGTTAAAACT
ACGGTCGCTC GTAAGATCAT CGCTCACGCG GAACGGATGC AGCTAGGCGT TAGCTACGCC
ACAATCTTCG GCATTGATGC AAAACGCCAT TTCGATGCGT CGGTAGATGC TTGCCTCTTG
GCCATGCGGT TCACGGGCGC CCTATCAGAT GCTGGTATCG ACTATGACGT TCACCTATCA
CTAGATGGCA ACGGCACAAC TCGCCGAGTT GGACATCGCC TCGGCCTGAC CGTTGGCGAT
CTAGTCCGGT TCGAGCAGCA TGCAGATTTG ATAGGGAGCA GTCCCCAGAA ATGGCGTTCC
GGTGTTAAGC ACGATGCGTC GTCGGTAATG GAGTTTGATT CTTCTGACGG TTTGCTTCGC
AACGGGCTAG ATGAAGAAGT GAGAATCGAG CTCGAATACC TGTATCCGCT GATGAAGGGT
TCTGATATTG GATCGAACCG CGACTGGCGC GGGAAGTTCG TTTTGGTCAC GCAACGTAAG
CCTGAGGACG AGACCGACGC CATCCGCGAG CGAGCGCCGC GCACGTGGCA GTACCTTGAT
GGTCACGGAG ACATTCTGGA CGCAAGAGGA AGCGCCATCT ACCGAAAGAA TCCGCGCTTC
GCGATCTTTG GCATCGGCGA CTATGCGTTC CGACCGTGGC GCATTGCGAT TTGCGGCCTT
TACAAGAAAC TCAACTTTCG ACTGGTCGGG CCAATTGAAG GTAAGCCCGT TCAATTCGAC
GACACCGTTT ACTACGTATC CTTCGATTCG CGCGATGAAG CGCAGGACGC GCTAGAGCGC
ATTTGTTCCA TTGAAGCCAC AGAACTGTAT TCGTCGCTCA TCTTCTGGGA TGAGAAAAGG
CCGATTAAAT CCAGCGTGCT CAATGCTGTC GATTGGTCGC GACTGCCTGT TCCGCACAAG
CGCCGCGCCG CATAG
|
|---|
| Protein sequence | MNEAKKRKIE FGDFQTPSAL ARLVCERLSL LGFAPDVVIE PTCGVGAFVL TAAQQFPRAE
VHGYEINPAY LDELRQSVEG LGVTRRVNLH QQDFFETDWL AELEAMPGNV LVLGNPPWVT
NAGQGAIGGT NLPQKSNFLK HKGFDAITGK ANFDISEWML IDLMRTLGAR GGDLAMLVKT
TVARKIIAHA ERMQLGVSYA TIFGIDAKRH FDASVDACLL AMRFTGALSD AGIDYDVHLS
LDGNGTTRRV GHRLGLTVGD LVRFEQHADL IGSSPQKWRS GVKHDASSVM EFDSSDGLLR
NGLDEEVRIE LEYLYPLMKG SDIGSNRDWR GKFVLVTQRK PEDETDAIRE RAPRTWQYLD
GHGDILDARG SAIYRKNPRF AIFGIGDYAF RPWRIAICGL YKKLNFRLVG PIEGKPVQFD
DTVYYVSFDS RDEAQDALER ICSIEATELY SSLIFWDEKR PIKSSVLNAV DWSRLPVPHK
RRAA
|
|---|
| |