| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1641 |
|---|
| Symbol | |
|---|
| ID | 6202777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1820346 |
|---|
| End bp | 1821149 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641703153 |
|---|
| Product | putative secreted protein |
|---|
| Protein accession | YP_001830322 |
|---|
| Protein GI | 182682162 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TCCTCCTATT GAGCACCATA CTGGCGGCTC TTCCCTTCAC TGCACAAGCA
CACAAAGCCT GGCTGCTCCC CTCACAGACA GTCATTGCCG GCCAATCACC GTGGATCACC
GTTGACGCAG CAATATCAAA CGATCTGTTC TATTTCAACC ACGCGCCGCT ATCCCTGGAC
ACCCTGATCA TCACCGCACC AAACGGTAGC CATGAGCGAC CACAGAACCC AACCAGCAGC
AAGTACCGTA GCGTATTCGA TGTCACACTG AGTCAACAGG GCACCTACCG ACTCAGTGTC
GTGAACGATG GGCTATCTGT CACCTGGACC GAGAATGGCC AACTCAAACG CTGGCGTGGA
GATGCCACAC GCTTCGCCGT AGAAGTACCC CAAAACACCC CAGACCTTAA CGTCACACAA
TCCCTTACCA GGATAGAAAC CTTTGTCACC AATGGGAATC CGAACCGGAC CGCACTCGAA
CCCAGCAACC ACGGTCTGGA ATTAGTCCCC ATCACCCATC CAAATGACCT GTTCGCTGGC
GAAACAGCAC AATTTTCACT ACGCATTGAC GGAAAAGAAG CCACTGGACT GGAAGTACAC
ATCATCCGCG GCGCAACTCG GTACCGTAAC TCACAGGATG AAATCAAAGT GACCACCGAT
ACCCAAGGAC ATTTCTCTGT CATTTGGCCC GAAGCCGGGA TGTATTTACT GGACATCACC
ACCGAAGACA CCAAGGTCAG CCTGTCACCC GCAAAGCAGC GTAGGCTTAA ATACATGGCC
ACCCTAGAAG TGCTACCACA GTGA
|
|---|
| Protein sequence | MKRFLLLSTI LAALPFTAQA HKAWLLPSQT VIAGQSPWIT VDAAISNDLF YFNHAPLSLD
TLIITAPNGS HERPQNPTSS KYRSVFDVTL SQQGTYRLSV VNDGLSVTWT ENGQLKRWRG
DATRFAVEVP QNTPDLNVTQ SLTRIETFVT NGNPNRTALE PSNHGLELVP ITHPNDLFAG
ETAQFSLRID GKEATGLEVH IIRGATRYRN SQDEIKVTTD TQGHFSVIWP EAGMYLLDIT
TEDTKVSLSP AKQRRLKYMA TLEVLPQ
|
|---|
| |