| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1628 |
|---|
| Symbol | |
|---|
| ID | 6204069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1804650 |
|---|
| End bp | 1805594 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641703140 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001830309 |
|---|
| Protein GI | 182682149 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.167111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGAA ATAACAACAG AGTGCTAGTC ACCGGGGGTG CTGGCTTTCT GGGATCCCAT
CTATGCGAGA AATTGGTTGC TTCCGGTCAC GATGTATTAT GTGTTGACAA TTTTTATACG
GGTAGCAAGG ACAGTGTCAT CAACCTGATT GGTCACCCTA AGTTTGAATT GATACGCCAT
GATGTCACCT TCCCACTCTA TGTTGAAGTC GACCGCATTT ACAATCTTGC TTGTCCGGCA
TCGCCAGTGC ATTACCAGCA TGATCCAGTG CAGACGACAA AAACCAGTGT GCATGGTGCA
ATCAACATGT TAGGGCTGGC CAAGCGGGTC AAGGCACGTA TTCTTCAAGC CAGCACCAGT
GAAGTGTACG GCGATCCAGA AATTCATCCA CAACTCGAAA CCTATTGGGG GCGTGTGAAC
CCGGTGGGCA TCCGTAGTTG CTATGACGAA GGGAAGCGTT GTGCGGAGAC ACTGTTTTTC
GATTATTGGC GCCAGCACAA GTTAGAGATC AAGGTCACGC GTATTTTTAA TACCTATGGT
CCGCGCATGC ATCCCAATGA TGGTCGGGTG GTGAGTAACT TCATTGTGCA GGCACTGCGT
GGTGAGCCAA TCACCATCTA CGGGGATGGT ACCCAAACGC GCAGCTTCTG CTACGTCGAT
GATCTGATTG ATGGCATGTT GCGAATGATG GAAAGTCCCA AAGATTTTAA TGGACCGGTA
AACATTGGTA ACCCCACTGA GTTTACGATG CTGCAGCTGG CTGAAATGGT CCTTAAATTG
GTGGGTAGTA TTTCAAAAAT CGTATTTCAA CCGCTGCCCT TGGATGATCC GAAACAGCGT
CAGCCGGATA TCACTTTGGC TAAATCTCAA CTTGGCTGGG AACCCAAGGT CTCGCTTGAA
GATGGCCTCA GGGAAACCAT TGCTTATTTC CGTAAGCGTG TTTAG
|
|---|
| Protein sequence | MSGNNNRVLV TGGAGFLGSH LCEKLVASGH DVLCVDNFYT GSKDSVINLI GHPKFELIRH
DVTFPLYVEV DRIYNLACPA SPVHYQHDPV QTTKTSVHGA INMLGLAKRV KARILQASTS
EVYGDPEIHP QLETYWGRVN PVGIRSCYDE GKRCAETLFF DYWRQHKLEI KVTRIFNTYG
PRMHPNDGRV VSNFIVQALR GEPITIYGDG TQTRSFCYVD DLIDGMLRMM ESPKDFNGPV
NIGNPTEFTM LQLAEMVLKL VGSISKIVFQ PLPLDDPKQR QPDITLAKSQ LGWEPKVSLE
DGLRETIAYF RKRV
|
|---|
| |