Gene XfasM23_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1608 
Symbol 
ID6202731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1782472 
End bp1783764 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content54% 
IMG OID641703120 
Producthypothetical protein 
Protein accessionYP_001830290 
Protein GI182682130 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTC CGTTGCAGAA CACTACGTTA TCTATGGTGT GTATGTCCTC TGCCACTCCT 
CCGCTACTCC CTATTGCCCA GAGCGAACGC ATCGCGATAC TCGACATCCT GCGTGGTTGT
GCGTTAATCG GCATTTTGCT CATGAATATT GAATGCTTCG TGGGGCCGCT GGATGCTGGT
ACCACTGGCA TTGATCCACA GTTGACCGGA ATGGACCGCA TCGCCGACGC TCTGATCTAC
GTGTTGATCC AAGGGAAGTT CTACACGCTG TTCTCACTCC TGTTCGGTAT GGGATTCGCG
GTGATGAGCA AGCGCGCCGC AGACGTCGGC CGCGCATTCA TGCCGTTCTA TTTACGACGC
AGCTTAGGAT TGTTGACAAT CGGACTCATC CACGCGGTAT TGATCTGGTC CGGGGACATC
TTGGTGCTGT ACGCACTGAT GTCATTGCCG CTGTTAATGT CACGTAGGTT ACCCACCGCA
GCGCTGCCAC TCACCGGGAC GTTGTTGTAT CTAATACCTG TGGCGCTGAT GTCAATATAC
TGCTGGGCGG ATTTTATCGT CTCGACAAGC TCCAATAGCG CGAACATCAA AAGCTGGCAA
GAAGTATTGG CACAGAACGG CACCGAGACG GCACAGTTAA TACGCGAACA GCGCCACGCC
TACGGTGCTG GCAGTTATGT GCAAGCCACC GTACAACGTC TGCATGATGT AAAAAATGGC
CTGGAATCGC TCATCATCAA CGGCGTACAT GTGTTAGGCA TGTTTTTGTT GGGAACGTGG
TTTGTACGCA GCGGTGCGAT TCTGCAACCA GAACGCTATA CGCGTTTGTT CGCTTGGCTG
CGTTGGGGTG CATGGCCGTT AGGGTTAACG GCTATGCTGC TCAGCGTTCA TCTGGCTTCT
TGGCAGGATG TGACTCGGGT CGACCCACGG GCATTCAGTG CATTTGCGCT GAGCATGATC
GCCGGGTTGT TGATGTGTCT GGGTTATCTG GCTTGGGGGA TACGTGCCGC CTTTGCCTTG
ACTTGGGCCG CACCCGCAGG ACGCATGGCG TTAAGCAATT ACTTGCTACA GTCGATGGTC
TGTACGCTGA TCTTTTATGG GTATGGTCTT GGTTTTTTTG AGCGCTTACC GCGGGTTTGG
CAGCTCCCAT TTGCAATCGC ACTGTTCACC TTTCAAGTGG CCTTAAGCCG ATGGTGGCTG
CAACGCTTCC GCTTCGGTCC CTGTGAATGG CTATGGCGCA GTTTTACCTA CCTACGCTGG
GAACCATTAC GCGTAGCCAG CACTGCACGC TGA
 
Protein sequence
MTAPLQNTTL SMVCMSSATP PLLPIAQSER IAILDILRGC ALIGILLMNI ECFVGPLDAG 
TTGIDPQLTG MDRIADALIY VLIQGKFYTL FSLLFGMGFA VMSKRAADVG RAFMPFYLRR
SLGLLTIGLI HAVLIWSGDI LVLYALMSLP LLMSRRLPTA ALPLTGTLLY LIPVALMSIY
CWADFIVSTS SNSANIKSWQ EVLAQNGTET AQLIREQRHA YGAGSYVQAT VQRLHDVKNG
LESLIINGVH VLGMFLLGTW FVRSGAILQP ERYTRLFAWL RWGAWPLGLT AMLLSVHLAS
WQDVTRVDPR AFSAFALSMI AGLLMCLGYL AWGIRAAFAL TWAAPAGRMA LSNYLLQSMV
CTLIFYGYGL GFFERLPRVW QLPFAIALFT FQVALSRWWL QRFRFGPCEW LWRSFTYLRW
EPLRVASTAR