Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1606 |
Symbol | |
ID | 6202727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1781307 |
End bp | 1781936 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641703118 |
Product | NLP/P60 protein |
Protein accession | YP_001830288 |
Protein GI | 182682128 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGCA TGGCTTGTCG ACGGGCGGTG CGTACTGGGG CGCACTGTGA TGAGGGTGGA AACGTAAAGG CGTTCGATTA TCCTGACTCC ATGAATAACA AGCCAGTTCC CATTGTTTTG CGGAGGACGT CCATTGGTTC GATCCTCTTC ATCCTCCCTG CAATGCTGAT TGGTTGCAGT CGCGTGCCGG TCAAAACACA GCCCAAGCTC GCTTCAGTCA ACGTGTGGCC CCTCACAACC CCAGCCAATC CAGAGGCAGC CAATGAGGTC GTGATGCGTG CCTTGAGCTT GGTTGGCACT CCGTACCGCT TCGGTGGCAA CACCCCTGAG AGTGGATTCG ACTGCAGCGG TTTAGTCAGC TACGTCTACC GCGATGCACT CGACTTGCGT CTACCGCGCA CTTCCTACGA GCTGGCCGCA GTGCAGGGTC CCAAGATTGA CGCTGAACAA CTGACCACTG GTGATTTGGT GTTCTTTGGG AGTGCCCGTA GTGTCACTCA CGTGGGCATC TACCTCAGTG AAGGTCGCTT CGTACATGCC CCCAGCAGTG GTGGCACCGT GCGTTTGGAT CGGCTTGATA CCCCTTACTG GAGGGATCAT TACACTGGCG CAAAACGTGT TTTACGCTGA
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Protein sequence | MLSMACRRAV RTGAHCDEGG NVKAFDYPDS MNNKPVPIVL RRTSIGSILF ILPAMLIGCS RVPVKTQPKL ASVNVWPLTT PANPEAANEV VMRALSLVGT PYRFGGNTPE SGFDCSGLVS YVYRDALDLR LPRTSYELAA VQGPKIDAEQ LTTGDLVFFG SARSVTHVGI YLSEGRFVHA PSSGGTVRLD RLDTPYWRDH YTGAKRVLR
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