| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1599 |
|---|
| Symbol | |
|---|
| ID | 6202720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1773593 |
|---|
| End bp | 1774468 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641703111 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001830281 |
|---|
| Protein GI | 182682121 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAAG CGCTGTTCAC GCGCTGGTGC CAACGCACCG ACAGCTACTT AGAACGAACG
TTATCCATCC CCACCCAAGC ACCACAGCGG CTCCAGGCCG CGATGCGATA CACCGTACTG
AGTGGCGGCA AACGCATCCG TCCCTTACTG GTTTACGCTG CCGGCCACCT GTTTCATGTC
GATGAACCCC TACTCGACGT ACCGGCTGCG GCCGTGGAAC TGATCCATGC CTATTCCCTG
GTGCATGATG ACCTTCCCGC CATGGATGAC GACCTCTTAC GCCGAGGGCG TCCCACCGTC
CATATCGCCT TCGACGAAGC CACTGCAATC CTCACTGGCG ACGCCTTGCA GACCCTGGCG
TTTGAATGCT TAGCCGATGC CCCAGCCGAC ACCTCCCTGC GTATCGCCTG GTTACAGACA
TTGACACACG CCGCAGGAGT TGCCGGCATG TGTGGCGGCC AGGCACTAGA TATTGACGCC
ACTGGCCAAT CCCAGACACT CAAAGCACTG GAAGCCATGC ATGCGTTGAA GAGCGGCACA
TTGATGCGAG CCGCCGTGAG AATGGGTGCC CTGGCTGGCG ACCCTTCCGC GGAGGATCTG
CACTCCCTGG ACACCTTTGC GGCCACCCTT GGATTAGCAT TCCAAGTGCG TGACGACATC
CTGGATATCG AGTCTAGTTC CGAACAACTT GGTAAAACGG CTGGCAAAGA TGCCATACAG
CAGAAATCCA CCTTCCCCGC CCTGCTGAGC GTAGAAGGTG CCAAATGCTA TTTACAAGAA
TTGGCAGAAC GCCTGTACAC CCAATTGCAT CCTTACGGCG AACGTGCTGC CCCCCTGACC
GCACTGGCAC GCTTGGCTGT AGAACGTGCT CACTGA
|
|---|
| Protein sequence | MSKALFTRWC QRTDSYLERT LSIPTQAPQR LQAAMRYTVL SGGKRIRPLL VYAAGHLFHV
DEPLLDVPAA AVELIHAYSL VHDDLPAMDD DLLRRGRPTV HIAFDEATAI LTGDALQTLA
FECLADAPAD TSLRIAWLQT LTHAAGVAGM CGGQALDIDA TGQSQTLKAL EAMHALKSGT
LMRAAVRMGA LAGDPSAEDL HSLDTFAATL GLAFQVRDDI LDIESSSEQL GKTAGKDAIQ
QKSTFPALLS VEGAKCYLQE LAERLYTQLH PYGERAAPLT ALARLAVERA H
|
|---|
| |