Gene XfasM23_1568 details

Gene Information

• Locus tag: XfasM23_1568
• ID: 6202659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 1740125
• End bp: 1740784
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641703079
• Product: TPR repeat-containing protein
• Protein accession: YP_001830250
• Protein GI: 182682090
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4235] Cytochrome c biogenesis factor

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACCCA CGTTTTGGTT CCTGACGCTA TTATTCACCC TGGCAACATT AAGCCTGGTG 
CTAAAACCAC TGTGGCCCCA AGCACGCGGC ACCCTGGCAA TGTCATTACT CCTGCTGAGT 
CTTGCTGCCG CCGCACTGTA TACCTTGGTC GGCACCCCAC AGGCATTACA ACCGGCCCAG 
ATCGCCGCAC CGCAGACCCT TGATGCAGCC ATTGCACAAC TGCGTGACAC CTTGCATCAG 
CATCCAGAAC GGATAGAAGG CTGGATGCTA CTGGGACACG CACTGCGCCA ACAACAGCGT 
TTTGGCGAAG CACAGAAGGC CTTTACAGAA GCCGCGCGAC GCGCCCCAAA CAATCCCGAT 
ATTTTGATGG CTACTGCAGA AATACGGATG CACATGGCAC CAAACCAACG CCTTGACGCC 
GAAGCAATCG GCCTCCTCAA ACACGTCTTG ATCTTGCAAC CCCGGCACCA ACGCGCCCGC 
TGGTTTCTCG GCATGGCATA CCGCCAAGCC GGCGATGCCG CCGCCGCAGT AGCAACCTGG 
GAACCGCTGC TGAGCGTCGT CGACACCGCA ACCGCCCGCA GCCTAGGCGA ACAGATCGCC 
CTAGCACAGC ACGATGCCCA CGTAGCAGCA CAGCCACATC AATCGCACCC ACATCAATAA 

 

Protein sequence

MKPTFWFLTL LFTLATLSLV LKPLWPQARG TLAMSLLLLS LAAAALYTLV GTPQALQPAQ 
IAAPQTLDAA IAQLRDTLHQ HPERIEGWML LGHALRQQQR FGEAQKAFTE AARRAPNNPD 
ILMATAEIRM HMAPNQRLDA EAIGLLKHVL ILQPRHQRAR WFLGMAYRQA GDAAAAVATW 
EPLLSVVDTA TARSLGEQIA LAQHDAHVAA QPHQSHPHQ