| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1546 |
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| Symbol | |
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| ID | 6203808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1717307 |
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| End bp | 1718524 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703057 |
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| Product | TraB family protein |
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| Protein accession | YP_001830228 |
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| Protein GI | 182682068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCTT CTGTTTCCCC ACAACAAGAC GCCCTCACCG GACAACCGCT ACGTGTAGTT
GAACGCGATG GCGTGCACTA CACCCTCCTC GGTACTGCTC ACATCTCCCA AGCCAGCGTG
GCTGCGGTCA AACAGGAAGT TGAAAGTGGC TGCTACGACG CCATCGCTGT CGAACTGGAC
GCACAGCGCC TGCAAGCACT ATGCGATCCG GATACGTTAG CTAAGCTCGA CCTGATACAA
GTGATCCGTA AAGGACAATT GGCATTATTT GCAGCCAACC TGGCTCTAGC GGCATACCAG
CGCCGCCTAG CCAAGCAACT AGGCATCGAA CCTGGTGCCG AACTGAAGAC CGCGGTGACC
ATGGCACGCG AACGCGATCT CCCCGTCCAT CTGATCGACC GCGAAGTCGG CCTTACTTTT
AAACGTGCCT CGGCCAAACT TGGCTTCCTC GGAAAAATGA AGTTGGGCGG TGGACTGATT
GCCGGACTGT TCGCCGCCGA TGAGGTCGGA GAAGAAGAAA TTGAAAAACT CAAGCAAGGC
GACATGCTCG AAGCTAGCTT TGGCGACTTT GCCAACGAAA GCCCGGAGCT ATACCAAACC
ATCATCGCCG AGCGCGACCG CTACATGGCC ACCCGCCTAC GCGAAGAAGT AAACAGCGCA
ACACCCAAAG TACTGGTGGT TGTCGGTGCA GGTCATTTAA CTGGATTGGC CAAACACCTT
GAGAACGACA CAGAGCCACC TACCGAACTG CGCGCCCTAC TGGAAAAAGT ACAACAGAAA
AAACGCGTCC CCTGGTTCAC ACTGGGACTA ATGGCACTCA TCGCCACTGG TATTGTCCAC
GGATTCTTGC GTGGTGGCTT CGCAATGGGC ACGGATCTAT TACTACAATG GGCGCTATAC
ACTAGTACCC TAGCCGCACT CGGCTGCGCA TTAGCAGGCA GCCATCCATT AAGTGTGCTG
GTGGCATTAC TGGTCGCACC ATTCAAACCG TTCCGGGTAA CCCTACCGAC TGGTGCCTTC
GCCGCACTGG TCGAAGTGCA TATGCGCAAA CCAGCCTACC AAGACTTCCT CACCCTACGC
GACGACGCGC AAACCCTCTA CGGCTGGTAT AAAAACCGAG TCTCAAGAGT GATGCTGACC
TTCGCATTCA CCAACCTAGG CAGCATGCTC GGCGTCTGGA TTGCCGTTGT AAGCATCTAC
AATCGCCTAC ACAGCTAA
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| Protein sequence | MIPSVSPQQD ALTGQPLRVV ERDGVHYTLL GTAHISQASV AAVKQEVESG CYDAIAVELD
AQRLQALCDP DTLAKLDLIQ VIRKGQLALF AANLALAAYQ RRLAKQLGIE PGAELKTAVT
MARERDLPVH LIDREVGLTF KRASAKLGFL GKMKLGGGLI AGLFAADEVG EEEIEKLKQG
DMLEASFGDF ANESPELYQT IIAERDRYMA TRLREEVNSA TPKVLVVVGA GHLTGLAKHL
ENDTEPPTEL RALLEKVQQK KRVPWFTLGL MALIATGIVH GFLRGGFAMG TDLLLQWALY
TSTLAALGCA LAGSHPLSVL VALLVAPFKP FRVTLPTGAF AALVEVHMRK PAYQDFLTLR
DDAQTLYGWY KNRVSRVMLT FAFTNLGSML GVWIAVVSIY NRLHS
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