Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1537 |
Symbol | |
ID | 6202587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1709710 |
End bp | 1710888 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641703048 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_001830219 |
Protein GI | 182682059 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTCC TGGATGAATG GTTCTGGTTT TTCTTATTTC TGCCTCTGGC TGCTTTGAGC GGCTGGGTCA TTGGCCGACG GGGAGGGCAA CGACATGGGC ATGCCCAGGT TAGCCGATTG TCCAGTACTT ATTTTCGCGG ACTGAATTAC TTACTCAGTG AACAACCCGA TAAAGCAATC GAGTTGTTTC AGCATATTGC GGAGCTGGAT AAGGAAACGT TTGAGACACA AGTTGCACTT GGTCATTTGT TCCGCCGTCG CGGCGAGATT GATCGTGCGA TCCGATTGCA TCAAGGATTG TTTAAGCGGC CTGATTTGAC CGACCATCAA AAGGTGTTTG CCTTACTTGC GTTGGGCGAG GATTACATGA AGTCTGGATT ACTGGATCGT GCAGAGACAG TCTTCACAGA ACTTGCGCAG ATTGATCAAC GTGCACCGCA AGCGCTACGC CACTTAATCA GCATCTACCA AGCGGAGCGT GATTGGGAGA AAGCGATCGA TAATGCGATT CGCTATGAAG TGGTGACTGG AGAGCCGATG GGCAAGCTTA TTGCTCAATT TGAATGCGAG TTGGCAGATC GTTACCGTGC TTCCAACCAG CATGATAGGG CGCTGGAAGC GGTCAGCCGT GCTTACCAAG CCGATGCGAC TTCGGTACGT TCCGGTATCA TTGAAGGTCG CATTGAGGCT GATTTGGGTC ATCATGAGGC TGCGGTCCGC GCTTGGGAGC GTGCTGCGCG CCATGATCCC GAATATCTTC CGGAGATCAT TCCGTCGTTG CTGATTGCCT ATCGTCAAGT GGGTGATATT GCTGGGGCCC GTAATTTCCT TTCCGAGATG ACAGAGCACT ATCGTGGTAT TGCACCCGTT TTGGCAATGA CCCAACTGAT TGAATCGCAG GAAGGACCAG CACAAGCGCG TGTTTATCTT GGTAGCCAGC TCAAAGCGAA GCCCTCGGTG CGTGGTCAAT CGGCGTTGAT TGATCTGACT CTGGCTGACG GAAGTGATCC GGTCGCATCT TTGTATGATC TAAAGCATAT TACCGATCAA CTGTTGGTAC GCAATCCGAG TTACCGTTGT ACGCGTTGTG GTTTTGGCGC TAAGACGCAT CATTGGCAAT GTCCAAGTTG TAAAGAGTGG GGAACAGTCA AACCATTGCT GAACTATGCG GTGGTCTAA
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Protein sequence | MEFLDEWFWF FLFLPLAALS GWVIGRRGGQ RHGHAQVSRL SSTYFRGLNY LLSEQPDKAI ELFQHIAELD KETFETQVAL GHLFRRRGEI DRAIRLHQGL FKRPDLTDHQ KVFALLALGE DYMKSGLLDR AETVFTELAQ IDQRAPQALR HLISIYQAER DWEKAIDNAI RYEVVTGEPM GKLIAQFECE LADRYRASNQ HDRALEAVSR AYQADATSVR SGIIEGRIEA DLGHHEAAVR AWERAARHDP EYLPEIIPSL LIAYRQVGDI AGARNFLSEM TEHYRGIAPV LAMTQLIESQ EGPAQARVYL GSQLKAKPSV RGQSALIDLT LADGSDPVAS LYDLKHITDQ LLVRNPSYRC TRCGFGAKTH HWQCPSCKEW GTVKPLLNYA VV
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