| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1535 |
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| Symbol | |
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| ID | 6202584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1706813 |
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| End bp | 1708720 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641703046 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001830217 |
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| Protein GI | 182682057 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCATT GGCGTAACTG CTTGGCCAGC GCTGTGCCTA AGTTGGCTGT CATTGCTCAT
GACTTGATCC AGGTTTGGGT ATGCTGGGTT GCTCTACATG CAGCGCGTTA CTCAATGTTA
GTGCACCCCC CGGGTTTGCC GTATGTCGAC TGGCGCACCC TGGTTGTTCT CATTGCGCAA
GCGGTTGTTT TCTGGCGAGT CGGTCTATAT CGCGGTTTAT GGCGTTTTGC AAGCGTCCCT
GATCTTTGGA ATATCTTCAA ATCTGCTTTC TCTGGTCTGA TCGTGATTGT GTTGGTGTTG
TCGGTCACTC GGTTTGAGGG GGTACCGCTA TCTGTGTTGG TTGTTTATCC CTTTGCGTTG
TCAGTGTTGC TTGGGATGCC TCGGTTGCTG TATCGGGCTT GGAAAGACTA CCAATTGATT
CACCCGGTCG ATTCCTCTGA GCGTGTACTG ATCCTGGGTG CTGGGCGTAC CGCTGAGGCG
CTAGTACGCG ATATGCGCCG TACTGGTGCG TTTGTTCCTG TTGGTTTCAT TGACGATGCG
GTGTACCTGC GTGGCGCCAA AATTCAGGGT TTGAACGTTC TTGGTCGTTT GGAAGAAGTC
AGCACGATTG CCCGTGAGAC TGCAGCTAAA TTACTGGTGA TCGCGATCCC TTCGCTTGAC
GCTGCCGGCA TGCAGCGTGT GGTGGCGATG TGTGAAAGTA CTGGCTTGCC GTTCCGGATG
GTACCTAAGC TGATTGATGT GCTCGAAGGC CGCACCCTGC CGTGTCAACT GAAGGAAGTT
TCAATTGAGG ACCTTCTCAA TCGCAAACCG GTGATTCCGG ACTGGCGTCT GATCCGTAGT
TGGTTATCTG GAAAGACTGT GATGGTGACG GGCGGCGGCG GTTCTATTGG CTCGGAGGTG
TGTCGTCAAT GTGCGCGTCA CGGTGCGAGC CGGGTAGTGA TCGTTGAGAT TGATGAGCTG
GCGTTGCTGA CGATTCATTC TGACCTACGC AGACTGTTTC CAGATATTGA GGTACTTCCT
ATTCTTGGTG ATTGCGGTGA TGCTGCTGTG ATCGCTCATG CATTGCGTTG CGTGCGTCCG
GATGCGGTGT TTCATGCAGC AGCCTATAAA CAAGTGCCGC TGCTCGAAGA GCAATTGCGC
GAAGCAGTAC GTAACAATGT TTTGGCGACC GAGAACGTGG CGCGCCATTG TGTTGCAGCC
AAAATTCAAA CTTTCGTGTT TATCTCTACC GATAAGGCGG TAGAGCCGGT GAATGTGCTT
GGTGCAACAA AGCGTTATGC GGAGATGGTT TGTCAGAGTT TTGATGCTAA GAGCACTGGG
ACGCGTTTCG TTACCGTGCG TTTCGGCAAC GTGCTCGATT CGGCAGGCAG TGTGGTGCCA
CTGTTCCGTG AGCAGATTCG TCAGGGGGGG CCAGTGACGG TGACTCATCC AGACGTGACT
CGTTATTTCA TGACCATCTC CGAGGCTTGC CAGCTGATCT TGCAAGCTGC GGCGTTGGCA
TCGCATGGCG CGATTTACAC ACTCGACATG GGGGAGCCTG TACGGATCAA TTTGTTGGCC
GAACAGATGA TCCGTTTGGC TGGTAAGCAG CCGGGTCGCG ATATCGTCAT TGTTTACACC
GGATTGCGTC CCGGTGAGAA AATGCATGAA ACGCTTTTTT ATGCTGATGA AAACTATCGA
CCGACGGCAC ATCCTAATAT CCTTGAGGCG GATGTACGCA CGTTTCCCCA AGAGCAAGTG
TTGCAATCGG TGATGCGTCT ACGTGAGGCG GTGCAACATT ACGATACTGT CGAGATTGAG
TCGGTGATTA GTATGTTGAT GCCAGATTTC CATGCTGCAC GTCATAAAAA AGAAACAAGA
TTCGAAACAG TTGTCCCATT CCCAGCACGT GAGGTCAGAA GACTGTAA
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| Protein sequence | MIHWRNCLAS AVPKLAVIAH DLIQVWVCWV ALHAARYSML VHPPGLPYVD WRTLVVLIAQ
AVVFWRVGLY RGLWRFASVP DLWNIFKSAF SGLIVIVLVL SVTRFEGVPL SVLVVYPFAL
SVLLGMPRLL YRAWKDYQLI HPVDSSERVL ILGAGRTAEA LVRDMRRTGA FVPVGFIDDA
VYLRGAKIQG LNVLGRLEEV STIARETAAK LLVIAIPSLD AAGMQRVVAM CESTGLPFRM
VPKLIDVLEG RTLPCQLKEV SIEDLLNRKP VIPDWRLIRS WLSGKTVMVT GGGGSIGSEV
CRQCARHGAS RVVIVEIDEL ALLTIHSDLR RLFPDIEVLP ILGDCGDAAV IAHALRCVRP
DAVFHAAAYK QVPLLEEQLR EAVRNNVLAT ENVARHCVAA KIQTFVFIST DKAVEPVNVL
GATKRYAEMV CQSFDAKSTG TRFVTVRFGN VLDSAGSVVP LFREQIRQGG PVTVTHPDVT
RYFMTISEAC QLILQAAALA SHGAIYTLDM GEPVRINLLA EQMIRLAGKQ PGRDIVIVYT
GLRPGEKMHE TLFYADENYR PTAHPNILEA DVRTFPQEQV LQSVMRLREA VQHYDTVEIE
SVISMLMPDF HAARHKKETR FETVVPFPAR EVRRL
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