| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1523 |
|---|
| Symbol | |
|---|
| ID | 6203861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1691572 |
|---|
| End bp | 1693182 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641703034 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_001830205 |
|---|
| Protein GI | 182682045 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CCCATCTGCT TCGAGGATTG CTCTCCTTCA GTACCATGAC CACCATTTCG
CGTGTGCTGG GCTTGGTGCG GGACCAAGTG ATTTCCGCCC AGTTTGGTGC CAATGCCATC
ACAGACGCCT TCATGGTGGC ATTTCGTGTC CCCAATTTCC TGCGTCGCCT GTTTGCCGAA
GGCTCATTCG CGACGGCCTT TGTCCCGGTA TTTACCGAAG TCAAAGAAAC CCGCTCACAC
ACTGATCTAC GCGCACTGAT GGCACGGGTT TCTGGCACCC TGGGCGGCGT CCTATTGGTC
GTGACTGCAT TGGGACTGTT ATTGGCACCC CAGTTGGCTT GGCTATTCGG CACTGGCGCC
AATACTGACC CGGCAAAACA GGGATTGTTG ACGGAATTAT TTCGGCTGAC CTTCCCATTT
CTGTTTTTCG TTTCCCTGAC TGCGCTGGCA AGCGGTGCAC TGAACAGCTT CCAGCGCTTT
GCAATGCCGG CGCTGACCCC CGTCATCCTG AATTTGTGCA TGATTAGCAG TGCCTTGTGG
CTGGCGCCAC GACTGCAAGT GCCCATCCTG GCCCTGGGGT GGGCCGTATT GGCTGCCGGC
ATCCTGCAAT TACTGTTTCA ACTTCCGGGA TTGCGTCGTA TCGATCTGCT CACCCTGCCA
CGCTGGGGCT GGAATCATCC TGATGTGCGC AAAATCCTCA CACTGATGGT GCCCACCCTG
TTTGGTTCTT CCATTGCTCA AATCAACTTG TTAATGGATA CCTTCATTGC TGCCCGACTG
AGCGACGGCT CCCAGACCTG GTTGTCACTG GCTGACCGCT TTCTGGAACT GCCACTGGGT
GTCTTCGGTG TCGCCTTAGG CACCGTTATC TTACCGACCC TGGCACGCCA CCACGTCAAG
ACCGACACCG CCAGTTTCTC CAATGCCTTG GACTGGGGAC TCCGCACCAC CTTACTCATT
GCAGTCCCGG CGATGCTGGC CTTACTGCTG CTGGCTGAGC CATTGGTGTC CACACTATTC
CAATACCATC ACTTCACCGC CTTTGATGTC CGCATGACGG CCCTTTCAGT CTATGGATTG
AGTTTGGGCC TACCTGCCTT CGCACTACTC AAAGTGGTTC TTCCCGCGTT TTACGCACGC
CAAGACACCA AGACGCCAGT GCGTGCCGGC ATTGCTGCCT TGCTTACCAA TATGCTGTTG
AATTTTGCAT TCCTAGCATT GCTGTACCAG CTGATGGTTC CCGACGCCCT GAAAGCCCAA
GGCATCCTGG CCGCCCTGGG CCAACAGCCG GGATTGCATC TGGCCCTAGG CATCGCCAGC
GCCTTATCCA GCTACCTCAA TCTTGGATTG CTCTGGTATT GGCTCAGCCG CAGCAACATC
TACACTCACT CCCCAGGGTG GAGGCCATAC ATGCTACGTC TGACACTGGC ATGTGCCGCA
ATGGCTGCAG TCCTACTGGC ACTGATGCAC TGGCGAACCG ATTTCCTCAC TATGGACCGT
TGGCAAAAGA TGGGTTGGTT GGCGATTCTG GTGAGTGCAG GGGGAGGGAC CTACCTGGTG
ACTCAAGTCC TCCTAGGCTG GCGCCTGCAT CACCTGCGCC CCAGTGCCTG A
|
|---|
| Protein sequence | MSKPHLLRGL LSFSTMTTIS RVLGLVRDQV ISAQFGANAI TDAFMVAFRV PNFLRRLFAE
GSFATAFVPV FTEVKETRSH TDLRALMARV SGTLGGVLLV VTALGLLLAP QLAWLFGTGA
NTDPAKQGLL TELFRLTFPF LFFVSLTALA SGALNSFQRF AMPALTPVIL NLCMISSALW
LAPRLQVPIL ALGWAVLAAG ILQLLFQLPG LRRIDLLTLP RWGWNHPDVR KILTLMVPTL
FGSSIAQINL LMDTFIAARL SDGSQTWLSL ADRFLELPLG VFGVALGTVI LPTLARHHVK
TDTASFSNAL DWGLRTTLLI AVPAMLALLL LAEPLVSTLF QYHHFTAFDV RMTALSVYGL
SLGLPAFALL KVVLPAFYAR QDTKTPVRAG IAALLTNMLL NFAFLALLYQ LMVPDALKAQ
GILAALGQQP GLHLALGIAS ALSSYLNLGL LWYWLSRSNI YTHSPGWRPY MLRLTLACAA
MAAVLLALMH WRTDFLTMDR WQKMGWLAIL VSAGGGTYLV TQVLLGWRLH HLRPSA
|
|---|
| |