| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1512 |
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| Symbol | |
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| ID | 6202545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1669101 |
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| End bp | 1675424 |
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| Gene Length | 6324 bp |
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| Protein Length | 2107 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641703024 |
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| Product | hemolysin-type calcium binding domain-containing protein |
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| Protein accession | YP_001830196 |
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| Protein GI | 182682036 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.821841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACGA ATTTAGATTT TTATTTTGAT CAGGCGACAT TAGATCGTGC TGAGGCTTAC
AGAAATTCTG GGAATTATCC GGCGATGTAC CAGACATTGT CCGATGCCGT CAGCGCCGGT
GGCGGCGATA CCAGATTGGT GAATTGGCTG ACACTTGCCG GGCAGATTAA TTCAGGGCGA
GGGGAAAATT TCTACGCAGA TTTTGTACGC GGCGCGGTGT ATCACGCGGG CAGTGAGGCG
GGTATACCTA TTGATGCGGC GCTGTTTCAG CACGTCTCCG ACTTACTTGC AAGGAATGTA
ATGGATGATG CGTTACAAAA TAAAATGCTT TCTTTCGATA GAGTCATTTC AAGAGACGTG
GCGGCAGCCT CAGAACCAGT AGGAGCAGGC GGATTGGGGC TGGCGATGGA TAAATGGGGC
GGGACGGTGG GCGGTGCGTT CCCAATCTCT GTGGGTGGGC TGGGGATGGA CCCCAATTCC
GCGTTTTATC AAAATCTTGA AAGATTCTAT CGGGAGAATG GATATACCCC TGGTGATCGG
GCCGCCAGAC TCTTCGATTT GTTGGATGAC TCTTTCTTCG GCCTGATTGA GGTGGCTAAC
AATCCGATCG CCATCAATGA TCTTGCAAAC AGAATTACGG TCAATACGCT CACTCGATTC
GCCATCATCA CGCAACGTCA ATGGGAAGTT GCGAATATAT TTTCTGGGTT GAGCGGGGAT
GCCACGCAGA GCGGCAGCCT GTCAGAAATT GTCTGGAACA GTTACCGCAA TACAGTCGCA
AACGCAGGAA TCATGTTATT CCCGGTCTCG CCTTTGGCTG GGGTCGGTAT GCAGATGGGC
ATCAATATGG GGATGGCCGT TGCTCCCTTG GTGGGTGATG TTCTCTCCGG AGCAACAGCC
ACCTGGAACC GTTGGATGCA ACCGCTATTT GATCAACTGC GGGATATGAT CCGCGACAGC
ATCCAACATG GCGCCGATGC GGTGCGGCAA ACGCTGCATG ACTGGTGGAC ACATATCGGC
GATGCATACC ACCGCCTCAG CGAGAAGTTG CACACAGACA ACGCCTCCCT GCTAGATCTG
CTGCATGACC TGTTTCGTCA TAGCCGTGAT GTACGCGACC CGCTGGTGCT GGACCTGGAC
GGCGACGGCA TCGAAACACT GGCCGCGGGC AAAAACATCC TCTTTGACCA CGACGGCGAC
GGCATCACCC ACGCCAGCGG CTGGGTGAAG TCCGATGACG GCTTGCTGGT CCTGGACCGC
AACGGCAACG GGCGTATTGA TAACGGCAGC GAACTGTTCG GCGCCGATAC CGTACTCAGC
AACGGTCACA CCGCCGCCTC TGGCTTTGAC GCGCTGCGTG ATTTAGATAG CAACGGTGAT
GGCCTCTTCA GTGCTGCCGA CGCCCGCTTT ACGGACGTGC GCGTCTGGCG CGATCTCAAC
CAAGATGGCC AGTCCCAGGC CAACGAACTG TTCACCCTCT CCACCCTGGG CATTGCCTCC
ATCACCCTCA CGCCTACGGA CACCCAACGC GTGAACCTGG GCAACGGTAA CGTGATGGAT
GCCCGCGGCA GCTACACCCG TACCGATGGC CGCAGCGGCA CCGTTGGCAA TCTGCAATTA
GGTGTGGACC AGTTCTACCG CGATTACCGC GGCGCCCACG ACAAGGTGAC CATCAATGAC
GCGGCCCGCG CCTTGCCAGC CATCAGCGGC AGCGGCGCGG TACGCGATTT GCAAGAGGCC
GCCAGCCTCT CACCTGCCTT ATTGGCGGCG GTGCAGGCGC TGCTCTCTGG CACCACCCAG
GGCACACTGC GTGCGGCGCT GGATCAGGTG ATCGCCTTGT GGGCCAGCAC CTCAACCATG
CGCAGCAGCG AGGAATCCCT GGAAGCCTCC GGGGAGGGCA ACCGCACGGT GTATTACCAC
GGCTGGGTCC CCGGGAGCGT AGCCTCCCAA GGCAAGGAGG CGGTGCAAGC CTGGATACAA
CAGCAGCACG CCCGGCTTGG ACCGATCATC GGCATTCTGG AAAAGTTCAA CGGCTCCCGC
CTGGTCAGCG AGCAAAACGG CCAGATCACC ATGAGCGGGC TGACCTTCGC CTGGCAACCT
GTTGTCCGCC CTGACGGACA CAGTGAAGCA GTGATGGACC TTGCACTGCC GCCGGAGGTA
GTAAGCAACA CCTTCGACGC CTTTACCCAG GCCTACGCCA AGCTCAAAGA ATCCATCTAT
ATCCGCCTGG TGCTGGAGCC ACGGCTCACT GATTACCTGT CCGGACTCCG CCTGACCTAC
AACAACGGCG TGATGGGATG GGATGCCTCC GGCCTGGAGG CCAAGTTAGA TCAGACCTGG
CAGCACAACA AAGCTCAGGC GCTACAAGAT GTGATGGACT TACAGCGCTA CGGCCGTGAC
GCCCTGGCCC CCAGCGGTTG GAATCCCCTG GATGCCTTAC GCCAGATGGT CGACCGGACT
GCGGTAACGC CCGATGGAAG GCAGGCCCTA GCCGATGCGG GCATTCCCCT GATTGCCGGA
AATGCCGAAG GTAGTGACGC CACAGATCTG CTGTTTGGCG ATGCCGGTGC CAATCTCCTG
CGGGGCGGCG GCGGTGATGA TCTGCTCTCC GGCGGTGATG GAGACGACAC CCTGGAAGGC
GGCGCGGGCA ACGATACCCT CAGCGGCGAT GCAGGTAACG ATGTACTGGA CGGCGGCACC
GGCAGCAACC GCCTAGAAGG CGGCGCCGGT AACGATGTGC TGAAAGTGTC GTATTGGTCC
GCAGATAACG TGCTGAACGG TGGCAGCGGT GATGACCTGT TGTACGGCAG CGCTTACGCG
GATACGTATC TATTCAACAA AGGAGACGGC CACGACACGA TCATTGAGCA AAGCGGTGAT
GACAAACTCG TCTTTGGTGA GGGCATTGCA GCCGCTGATG TCCGGTTACT ACGCCAAGGG
CAAGATGTGG TGCTGGACCT GGGCAACGGC CACGACAGCA TCCGTTTGAA AGACTGGTTG
GATTCCAACG GTTACCGCAA CGGCAACAAT GACATTGAAC AGATCGTCTT TGCCGATGGA
ACGATCTGGA CTCCAGAGAC CTTGAGCAGC ATGGGCCTCA CCACGCTGGG CACCTTGGGC
AATGACACCC TCAATGGCTG GCAAGGCAAG GATATTCTGC TGGGCGGCGA TGGCGATGAC
ACCCTCTACG GCAGCGGCGG CAATGATCTG CTGCTGGGCG GTGCTGGCGA TGACGTCCTA
GACGGCGGCA CCGGCAGCAA CCGCCTAGAA GGCGGCGCCG GTAACGATGT GCTGAAAGTG
TCGTATTGGT CCGCAGATAA CGTGCTGAAC GGTGGCAGCG GTGATGACCT GTTGTACGGC
AGCGCTTACG CGGATACGTA TCTATTCAAC AAAGGAGACG GCCACGACAC GATCATTGAG
CAAAGCGGTG ATGACAAACT CGTCTTTGGT GAGGGCATTG CAGCCGCTGA TGTCCGGTTA
CTACGCCAAG GGCAAGATGT GGTGCTGGAC CTGGGTAACG GCCACGACAG CATCCGTTTG
AAAGACTGGT TGGATTCCAA CGGTTACCGC AACGGCAACA ATGACATTGA ACAGATCGTC
TTTGCCGATG GCACGATCTG GACTCCAGAG ACCTTGAGCA GCATGGGCCT CACCACGCTG
GGCACCTTGG GCAATGACAC CCTCAATGGC TGGCAAGGCA AGGATATTCT GCTGGGCGGC
GATGGCGATG ACGTCCTAGA CGGCGGGATG GGCAGCAACC GCCTAGAAGG CGGCGCTGGT
AACGATGTCC TGAAAGTATC GTATTGGTCC GCAGATAACG TGCTGAACGG TGGCAGCGGT
GATGACCTGT TGTACGGCAG CGCTTACGCG GACACGTATC TATTCAACAA AGGAGACGGC
CACGACACGA TCATTGAGCA AAGCGGTGAT GACAAACTCG TCTTTGGTGA GGGCATTGCA
GCCGCTGATG TCCGGTTACT ACACCAAGGG CAAGATGTGG TGCTGGACCT GGGTAACGGC
CACGACAGCA TCCGTTTGAA AGACTGGTTG GATTCCAACG GTTACCGCAA CGGCAACAAT
GACATTGAAC AGATCGTCTT TGCCGATGGC ACGATCTGGA CTCCAGAGAC CTTGAGCAGC
ATGGGCCTCA CCACGCTGGG CACCTTGGGC AATGACACCC TCAATGGCTG GCAAGGCAAG
GATATTCTGC TGGGCGGCGA TGGCGATGAC ACCCTCTACG GCAGCGGCGG CAATGATCTG
CTGCTGGGCG GTGCTGGCGA TGACGTCCTA GACGGCGGCA CCGGCAGCAA CCGCCTAGAA
GGCGGCGCCG GTAACGATGT GCTGAAAGTG TCGTATTGGT CCGCAGATAA CGTGCTGAAC
GGTGGCAGCG GTGATGACCT GTTGTACGGC AGCGCTTACG CGGATACGTA TCTATTCAAC
AAAGGAGACG GCCACGACAC GATCATTGAG CAAAGCGGTG ATGACAAACT CGTCTTTGGT
GAGGGCATTG CAGCCGCTGA TGTCCGGTTA CTACGCCAAG GGCAAGATGT GGTGCTGGAC
CTGGGCAACG GCCACGACAG CATCCGTTTG AAAGACTGGT TGGATTCCAA CGGTTACCGC
AACGGCAACA ATGACATTGA ACAGATCGTC TTTGCCGATG GAACGCTCTG GACTCCAGAG
ACCTTGAGCA GCATGGGCCT CACCACGCTG GGCACCTTGG GCAATGACAC CCTCAATGGC
TGGCAAGGCA AGGATATTCT GCTGGGCGGC GATGGCGATG ACGTCCTAGA CGGCGGCACC
GGCAGCAACC GCCTAGAAGG CGGCGCTGGT AACGATGTCC TGAAAGTGTC GTATTGGTCC
GCAGATAACG TGCTGAACGG TGGCAGCGGT GATGACCTGT TGTACGGCAG CGCTTACGCG
GATACGTATC TATTCAACAA AGGAGACGGC CACGACACGA TCATTGAGCA AAGCGGTGAT
GACAAACTCG TCTTTGGTGA GGGCATTGCA GCCGCTGATG TCCGGTTACT ACGCCAAGGG
CAAGATGTGG TGCTGGACCT GGGTAACGGC CACGACAGCA TCCGTTTGAA AGACTGGTTG
GATTCCAACG GTTACCGCAA CGGCAACAAT GACATTGAAC AGATCGTCTT TGCCGATGGA
ACGATCTGGA CTCCAGAGAC CTTGAGCAGC ATGGGCCTCA CCACGCTGGG CACCTTGGGC
AATGACACCC TCAATGGCTG GCAAGGCAAG GATATTCTGC TGGGCGGCGA TGGCGATGAC
ACCCTCTACG GCAGCGGCGG CAATGATCTG CTGCTGGGCG GTGCTGGCGA TGACGTCCTA
GACGGCGGCA CCGGCAGCAA CCGCCTAGAA GGCGGCGCCG GTAACGATGT GCTGAAAGTG
TCGTATTGGT CCGCAGATAA CGTGCTGAAC GGTGGCAGCG GTGATGACCT GTTGTACGGC
AGCGCTTACG CGGATACGTA TCTATTCAAC AAAGGAGACG GCCACGACAC GATCATTGAG
CAAAGCGGTG ATGACAAACT CGTCTTTGGT GAGGGCATTG CAGCCGCTGA TGTCCGGTTA
CTACGCCAAG GGCAAGATGT GGTGCTGGAC CTGGGTAACG GCCACGACAG CATCCGTTTG
AAAGACTGGT TGGATTCCAA CGGTTACCGC AACGGCAACA ATGACATTGA ACAGATCGTC
TTTGCCGATG GAACGATCTG GACTCCAGAG ACCTTGAGCA GCATGGGCCT CACCACGCTG
GGCACCTTGG GCAATGACAC CCTCAATGGC TGGCAAGGCA AGGATATTCT GCTGGGCGGC
GATGGCGATG ACGTCCTAGA CGGCGGCACC GGCAGCAACC GCCTAGAAGG CGGCGCTGGT
AACGATGTAC TGAAAGTGTC GTATTGGTCC GCAGATAACG TGCTGAACGG TGGCAGCGGT
GATGACACGT TGTACGGCAG CGCTTACGCG GACACGTATC TATTCAACAA AGGAGACGGC
CACGACACGA TCATTGAGCA AAGCGGTGAT GACAAACTCG TCTTTGGTGA GGGGCTGCAT
CGGGAAGAGG CGTGTTTTAC GCGCTCAGGT GATGATCTGT CTATCCTGTT CAATGGCAGT
GAGGATCAGG TGACTGTGGC GGGTTGGTTC AGTGAGGCAG CGCATCAGGT GGAATCGTTG
GTGTTCCAGG ATGGGACGGT GCTGTCCGGT GAGGTGGAGC GTTTGATTGC GGCGATGGCG
CTGTCCCCTG CGGTGACGAT GATGCAAGCC AGTGTGCGTG ATATCAAGGA GTCGCCCAGG
TTGGTCGCCA GTTCGATTGT GTGA
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| Protein sequence | MMTNLDFYFD QATLDRAEAY RNSGNYPAMY QTLSDAVSAG GGDTRLVNWL TLAGQINSGR
GENFYADFVR GAVYHAGSEA GIPIDAALFQ HVSDLLARNV MDDALQNKML SFDRVISRDV
AAASEPVGAG GLGLAMDKWG GTVGGAFPIS VGGLGMDPNS AFYQNLERFY RENGYTPGDR
AARLFDLLDD SFFGLIEVAN NPIAINDLAN RITVNTLTRF AIITQRQWEV ANIFSGLSGD
ATQSGSLSEI VWNSYRNTVA NAGIMLFPVS PLAGVGMQMG INMGMAVAPL VGDVLSGATA
TWNRWMQPLF DQLRDMIRDS IQHGADAVRQ TLHDWWTHIG DAYHRLSEKL HTDNASLLDL
LHDLFRHSRD VRDPLVLDLD GDGIETLAAG KNILFDHDGD GITHASGWVK SDDGLLVLDR
NGNGRIDNGS ELFGADTVLS NGHTAASGFD ALRDLDSNGD GLFSAADARF TDVRVWRDLN
QDGQSQANEL FTLSTLGIAS ITLTPTDTQR VNLGNGNVMD ARGSYTRTDG RSGTVGNLQL
GVDQFYRDYR GAHDKVTIND AARALPAISG SGAVRDLQEA ASLSPALLAA VQALLSGTTQ
GTLRAALDQV IALWASTSTM RSSEESLEAS GEGNRTVYYH GWVPGSVASQ GKEAVQAWIQ
QQHARLGPII GILEKFNGSR LVSEQNGQIT MSGLTFAWQP VVRPDGHSEA VMDLALPPEV
VSNTFDAFTQ AYAKLKESIY IRLVLEPRLT DYLSGLRLTY NNGVMGWDAS GLEAKLDQTW
QHNKAQALQD VMDLQRYGRD ALAPSGWNPL DALRQMVDRT AVTPDGRQAL ADAGIPLIAG
NAEGSDATDL LFGDAGANLL RGGGGDDLLS GGDGDDTLEG GAGNDTLSGD AGNDVLDGGT
GSNRLEGGAG NDVLKVSYWS ADNVLNGGSG DDLLYGSAYA DTYLFNKGDG HDTIIEQSGD
DKLVFGEGIA AADVRLLRQG QDVVLDLGNG HDSIRLKDWL DSNGYRNGNN DIEQIVFADG
TIWTPETLSS MGLTTLGTLG NDTLNGWQGK DILLGGDGDD TLYGSGGNDL LLGGAGDDVL
DGGTGSNRLE GGAGNDVLKV SYWSADNVLN GGSGDDLLYG SAYADTYLFN KGDGHDTIIE
QSGDDKLVFG EGIAAADVRL LRQGQDVVLD LGNGHDSIRL KDWLDSNGYR NGNNDIEQIV
FADGTIWTPE TLSSMGLTTL GTLGNDTLNG WQGKDILLGG DGDDVLDGGM GSNRLEGGAG
NDVLKVSYWS ADNVLNGGSG DDLLYGSAYA DTYLFNKGDG HDTIIEQSGD DKLVFGEGIA
AADVRLLHQG QDVVLDLGNG HDSIRLKDWL DSNGYRNGNN DIEQIVFADG TIWTPETLSS
MGLTTLGTLG NDTLNGWQGK DILLGGDGDD TLYGSGGNDL LLGGAGDDVL DGGTGSNRLE
GGAGNDVLKV SYWSADNVLN GGSGDDLLYG SAYADTYLFN KGDGHDTIIE QSGDDKLVFG
EGIAAADVRL LRQGQDVVLD LGNGHDSIRL KDWLDSNGYR NGNNDIEQIV FADGTLWTPE
TLSSMGLTTL GTLGNDTLNG WQGKDILLGG DGDDVLDGGT GSNRLEGGAG NDVLKVSYWS
ADNVLNGGSG DDLLYGSAYA DTYLFNKGDG HDTIIEQSGD DKLVFGEGIA AADVRLLRQG
QDVVLDLGNG HDSIRLKDWL DSNGYRNGNN DIEQIVFADG TIWTPETLSS MGLTTLGTLG
NDTLNGWQGK DILLGGDGDD TLYGSGGNDL LLGGAGDDVL DGGTGSNRLE GGAGNDVLKV
SYWSADNVLN GGSGDDLLYG SAYADTYLFN KGDGHDTIIE QSGDDKLVFG EGIAAADVRL
LRQGQDVVLD LGNGHDSIRL KDWLDSNGYR NGNNDIEQIV FADGTIWTPE TLSSMGLTTL
GTLGNDTLNG WQGKDILLGG DGDDVLDGGT GSNRLEGGAG NDVLKVSYWS ADNVLNGGSG
DDTLYGSAYA DTYLFNKGDG HDTIIEQSGD DKLVFGEGLH REEACFTRSG DDLSILFNGS
EDQVTVAGWF SEAAHQVESL VFQDGTVLSG EVERLIAAMA LSPAVTMMQA SVRDIKESPR
LVASSIV
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