Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1500 |
Symbol | |
ID | 6202519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1661987 |
End bp | 1663408 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641703012 |
Product | HlyD family type I secretion membrane fusion protein |
Protein accession | YP_001830184 |
Protein GI | 182682024 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TGCTCCAAGG ATGGCGCGAC TTTCTTTCGC GTTACCTCCA CGTCTTCCGT GCCGCCTGGT CGATTCGCGC CCAACTAGAA CCACCTCACC GCACCACCGA TGAGCGCACC TTCCTACCCG CCCATCTAGA ACTGACCGAA ACCCCGGTCT CCCCTACCGC ATGCTGGAGC ATGCGGATCA TTATTGCCTG CTTCATCGTG ACCCTACTGT GGGCCTGCTT CGGCAAAATT GAAATTGTTG CCGTCGCCCC GGGGAAAATC GTCGTCGACT CACGCACCAA AGTACTCCAA CCACTAGAGA CCGCCGTAGT ACGCCGTATC CTGGTCCGTG ATGGCGAAAA AGTGAAAGCA CACCAAGCAC TGATCGAACT TGATGCCACC GCCACCGGCG CCGAATACGC ACAAGCTGAA GATGCCTTAC TCAATGCCAC ATTGACCGCA TTGCGCCTGC GCGCACTCTC CACCGCACTA GAACGTGGCC AAACACCGCA ACTCACCCAT TCAGCAACCA TCCCCGCTGA TCGCATCGCC GCCGAACAAG CACTGACACT GAGCCAATTC AATGCATACC AAGCCAAACG CCACAACCTA CAAGCAACCA TTGCCCAACG CCGCGCCGAA CTACGGACAG CCCAAGACAC CATCGAACCA TTGACCGAAT CCGCACGCAT CTCCAAAATG CGCTCCGCCG ATTACGCCAT ACTCCTCAAA GACAAATACG TCGGCCGTCA CGACTACCTA CTGCGTGAAC AAGAACGCAT CACCGCCGAA CGCGACTTAG CAACCCAACG CAACCGCATC CAAGAAATCC GCTCCGCCCT GAGCGCAGCC CAAGAAGAAC TCAGCGTATT ACAAGCCGAC TTCCGCCAAC AAACCCTGGA TGACCTACGG AAAGCCGACG AACAGATCGG CCAATTGACA CCACAACTGG CAAAAGCCAA ACAACGTAAT CGACTCATGA CACTACGCTC CCCCGTTGAA GGCATCGTCC AGCAACTAGC CATCCACACC GTTGGTGGCG TCGTGACCCC CGCACAACAA CTCCTAGCCG TGGTCCCAGT ACAAGAAACA TTAGAAGTGG AAGCCACCGT CCTCAACAAA GACATCGGAT TTTTACGTCC CGAACAACGC GTCACCGTCA AAATTGAAAG CTTCCCCTAC ACCCGCTACG GATACCTCAC CGGCAAAATC ATCAGCATCT CCCATGACGC CGCACAAGAC GAAAAACTAG GCTTAGTCTT TCCCGTACGC ATCCGTTTAG ACAACACCAC ACTCACTATT GATGGAACAC AAATCAGAAT GAGCGCAGGC ATGGCATTAA GCGCCGAAAT CAAAACAGGC AAACGCACCG TTATTGATTA CTTACTGAGC CCCCTAGAAC AATATACCGA CGAAGCATTG CGGGAACGAT AA
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Protein sequence | MKHMLQGWRD FLSRYLHVFR AAWSIRAQLE PPHRTTDERT FLPAHLELTE TPVSPTACWS MRIIIACFIV TLLWACFGKI EIVAVAPGKI VVDSRTKVLQ PLETAVVRRI LVRDGEKVKA HQALIELDAT ATGAEYAQAE DALLNATLTA LRLRALSTAL ERGQTPQLTH SATIPADRIA AEQALTLSQF NAYQAKRHNL QATIAQRRAE LRTAQDTIEP LTESARISKM RSADYAILLK DKYVGRHDYL LREQERITAE RDLATQRNRI QEIRSALSAA QEELSVLQAD FRQQTLDDLR KADEQIGQLT PQLAKAKQRN RLMTLRSPVE GIVQQLAIHT VGGVVTPAQQ LLAVVPVQET LEVEATVLNK DIGFLRPEQR VTVKIESFPY TRYGYLTGKI ISISHDAAQD EKLGLVFPVR IRLDNTTLTI DGTQIRMSAG MALSAEIKTG KRTVIDYLLS PLEQYTDEAL RER
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