| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1488 |
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| Symbol | |
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| ID | 6203588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1644006 |
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| End bp | 1645241 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703001 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001830173 |
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| Protein GI | 182682013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATATT TTTTAAAAAT CTCCCTGCTT GCCGCAGCAC TCATGACCAC GTCATGCAGC
CAAGGCGACA AGAATAGTGC ACATCCTGCT GGCGCTGACA ACACACAAAG CGTTGAGAAA
CAGGGGGATA ACGCTCCAAT TCCTGTCACA GTAGTCGCAG CAAGCAGCCA AAATGTTCCT
GTGTACGCTG CCGCCCCAGG CACAGTGGCC GCAATGAATA CCGTCACGAT TAACCCGCAG
GTCAGTGGTC AATTGATCAG CCTACACTTC CGCGAGGGTG AATCAGTAAA AAAAGGCCAA
TTACTCGCCG AAATTGACGC ACGCGCACTT CAGGCCAGCT ACGATCAAGC CGCAGCGGCG
AAGCGTCAGA ACCAAGCACT GCTGGCAACC GCACGTGCCA ACTACACCCG CTCCAGCACG
TTGGAATACC AACCGTACGT CGCCAAGACA GAATTAGATA CACAACATAA CCAGGTCACG
CAGTATGAAG CGGCAGTCGC AGCAAACGAA GCCGCAATGC GAGCAGCCCA AGTACAGCTG
CAATACACTA AGATTGTCGC ACCGATCGAC GGCGTCGCCG GGATCCGCAG CGTAGATGCT
GGGAACGTGG TCACAACTAG CACCTCCATC GTGACACTGA CACAGATGCA TCCAATCTAC
GTCTCATTCA ATCTTCCCGA GCGCTTGTTG CAGGAAGTAC GCCAAGCCCA TGCCTCCGGC
CCCGTGATGG TGGCCGCGCT GGACCGCGGA GATGCACACC CACTGACCGA AGATGGCACA
TTGGATGCGA TCAATAACCA AATAAACACT GATAGCGGCA CTTTCAGCGC ACGTGCCGTG
TTCTCCAACC GCAATAACGC ACTATGGCCT GGCCAGTTCG TCAACGCGCG TCTGCAACTA
CGTACGATTG CCAATGGTGT CGTGATTCCG GCGCAAGCAG TGCAACGCGG CCCCAATGGC
GACTACGTTT ACCTTGTCAA GCAAGATCAC ACGGTCGTTA CTCAGGAAGT CACCCAAGGT
GTGGAAATCG GTGACAGCCA TGTACAAATC GCCAAAGGCT TGAATGTCGG CGACACAGTA
GTCACAGAAG GTCAATTCCG GCTCAAACCA GGCAGTAAAG TCATCGCGCT AGCACCAGGT
GAAACTCCAC CAGCACCAAC CGAAGCCGAA TTGAAGGCTG CTGCGGAAAA ACGCAGCAAA
AATAGCATGG GTGGTCCTCC TCGCGGCGGC CCATAA
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| Protein sequence | MPYFLKISLL AAALMTTSCS QGDKNSAHPA GADNTQSVEK QGDNAPIPVT VVAASSQNVP
VYAAAPGTVA AMNTVTINPQ VSGQLISLHF REGESVKKGQ LLAEIDARAL QASYDQAAAA
KRQNQALLAT ARANYTRSST LEYQPYVAKT ELDTQHNQVT QYEAAVAANE AAMRAAQVQL
QYTKIVAPID GVAGIRSVDA GNVVTTSTSI VTLTQMHPIY VSFNLPERLL QEVRQAHASG
PVMVAALDRG DAHPLTEDGT LDAINNQINT DSGTFSARAV FSNRNNALWP GQFVNARLQL
RTIANGVVIP AQAVQRGPNG DYVYLVKQDH TVVTQEVTQG VEIGDSHVQI AKGLNVGDTV
VTEGQFRLKP GSKVIALAPG ETPPAPTEAE LKAAAEKRSK NSMGGPPRGG P
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